Query= MSMg01no111_j22.b1 MSMg01no111_j22.b1 CHROMAT_FILE:
MSMg01no111_j22.b1 PHD_FILE: MSMg01no111_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:10 2005
(516 letters)
>mm_chr1_192735810_192736725
Length = 916
Score = 474 bits (245), Expect = e-138
Identities = 312/371 (84%), Gaps = 56/371 (15%)
Strand = Plus / Minus
Query: 146 ggaggccagaagagggcatcagatccctcagaactggagttacaggcagctaagagctgc 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ggaggccagaagagggcatcagatccctcagaactggagttacaggcagctaagagctgc 857
Query: 206 cactggcatgctgggatttgaacctcacccattcctccggaagagcaaccagagatccta 265
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 856 cactggcatgctgggatttgaacctcacccattcctccggaagagcaatcagagatccta 797
Query: 266 actaactactcaaccacatctctaattcttcttaccatctctgtttctccctctttgttt 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 actaactactcaaccacatctctaattcttcttaccatctctgtttctccctctttgttt 737
Query: 326 cttcccttccttccttccttccttccttccttccttccttccttccttccttccttcctt 385
||||
Sbjct: 736 cttc-------------------------------------------------------- 733
Query: 386 ccttccttccttccttaattgtgtgttctaggggttagaaggcagggaggagaggaagca 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ccttccttccttccttaattgtgtgttctaggggttagaaggcagggaggagaggaagca 673
Query: 446 atagacacagaattaacaacgacagaaccttgcaatgaatcttttgggaacgagagctct 505
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 672 agagacacagaattaacaacgacagaaccttgcaatgaatcttttgggaatgagagctct 613
Query: 506 gatcaagagaa 516
|||||||||||
Sbjct: 612 gatcaagagaa 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_j22.g1 MSMg01no111_j22.g1 CHROMAT_FILE:
MSMg01no111_j22.g1 PHD_FILE: MSMg01no111_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:11 2005
(329 letters)
>mm_chr1_192600653_192601379
Length = 727
Score = 557 bits (288), Expect = e-163
Identities = 319/330 (96%), Gaps = 4/330 (1%)
Strand = Plus / Plus
Query: 1 gtgtgaactgccaagtccagataccatagattttagaatatatacatatttggtttgttg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgtgaactgccaagtccagatagcatagattttagaatatatacatatttggtttgttg 260
Query: 61 tttgaatttgtggatgaagaatggacttacacaaagatatatacatatatgagtgtgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgaatttgtggatgaagaatggacttacacaaagatatatacatatatgagtgtgtgc 320
Query: 121 atctgtgtgtatgtgataacaatgctgtctcataattattactacatattctgtatcttt 180
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 atctgtgt--atgtgataacaatgctgtctcataattattactacacattctgtatcttt 378
Query: 181 tataaaaggtggggaagatgaataggagaaatacatttagagttgt-tttttttttaact 239
||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 379 tataagaggtggggaagatgaataggagaaatacatttagagttgggtttttttttaact 438
Query: 240 tgtctctcactgcactctgttcactgcatgctcagacctatttcccaccactccctccac 299
|||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 439 tgtctctcactgtactctgttcactgcatgctcagacctaagtcc-accactccctccac 497
Query: 300 cctgagagagtccctagctcctacatgtgc 329
||||||||||||||||||||||||||||||
Sbjct: 498 cctgagagagtccctagctcctacatgtgc 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 727
Length adjustment: 9
Effective length of query: 320
Effective length of database: 718
Effective search space: 229760
Effective search space used: 229760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
