Query= MSMg01no112_e16.b1 MSMg01no112_e16.b1 CHROMAT_FILE:
MSMg01no112_e16.b1 PHD_FILE: MSMg01no112_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:24 2005
(360 letters)
>mm_chr1_138490137_138490897
Length = 761
Score = 629 bits (325), Expect = 0.0
Identities = 347/357 (97%), Gaps = 7/357 (1%)
Strand = Plus / Plus
Query: 4 aacttctgaaatcccccatctctacctcccctgagctgggattataggcacacagctgtg 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 210 aacttctgaaatcccccatctctacctcccctgagctgggattacaggcacacagctgtg 269
Query: 64 gtggtctctggtgctatctctctcccttgcgtgcgtgatctctctctctcctctaattct 123
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 270 gtggtctctggtgctatctctctccct----tgcgtga--tctctctctcctctaattct 323
Query: 124 gtatctatcgtctgtctatctgtctgtctgtcgtgtgtatgtgtatatgatatgtgtgtg 183
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtatccatcgtctgtctatctgtctgtctgtcgtgtgtatgtgtatatgatatgtgtgtg 383
Query: 184 tgcgcacgtttgtgagtgtgggtgtgcatgtgccacaccattccttgtttcaggcttacc 243
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcgtacgtttgtgagtgtgggtgtgcatgtgccacaccattccttgtttcaggcttacc 443
Query: 244 actgagtttgccaggctagctcagcctcaggctgctggggaatctcttgtctctggcttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actgagtttgccaggctagctcagcctcaggctgctggggaatctcttgtctctggcttc 503
Query: 304 catcatactgca-caacttcatagttacagagctttgctgctatgcctggctttgcg 359
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catcatactgcagcaacttcatagttacagagctttgctgctatgcctggctttgcg 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 761
Length adjustment: 9
Effective length of query: 351
Effective length of database: 752
Effective search space: 263952
Effective search space used: 263952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_e16.g1 MSMg01no112_e16.g1 CHROMAT_FILE:
MSMg01no112_e16.g1 PHD_FILE: MSMg01no112_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:25 2005
(203 letters)
>mm_chr1_138626083_138626685
Length = 603
Score = 369 bits (191), Expect = e-107
Identities = 200/203 (98%)
Strand = Plus / Minus
Query: 1 atattcatttcttgagtttttcctaagtcctacagggcatttgagagtcctcgcacattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atattcatttcttgagtttttcctaagtcctacagggcatttgagagtcctcgcacattc 344
Query: 61 tccttctgggcttcaaatgtcatatgcgttttgtcaagaagcattctgagggatgggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tccttctgggcttcaaatgtcatatgcgttttgtcaagaagcattctgagggatgggctg 284
Query: 121 ggattcaatgggtggcatgcctgcctggcactgagaccagggggtgggtgggggtggtga 180
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 283 gggctcaatgggtggcatgcctgcctggcactgagaccagggggtgggtgggggtgggga 224
Query: 181 tcccaggctctgcataaacccag 203
|||||||||||||||||||||||
Sbjct: 223 tcccaggctctgcataaacccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
