ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTGCTTTTTCTTTTTAATTAGATGTTTTCTTCATTTACATTTCAAAT
GCTATCCCCTTTCTTAGTTTCCTCTCCGAAAATCTCATATACTCTCCCCC
CTCCCCCTGCTCCCAAACCCACCCACTCCCACTTCCTGGCCCTGGCATTG
CCCTATACTGGGGCATAGAATCTTCGCAAGACCAAGGGCCTCTCCTCCCA
CTGATGGTCAACTAGGCCATCCTCTGCTACATATTGAATCCTTTGCTTTT
AAAGGGAGAATTATTAGGGTAGGGTCATGCAAATAATCTTCCTAACTTTT
TAAAAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGCGTACACATTTCTTTCTACCCCCTAATCCCCCCCGCCCCTAC
TATTCCCCCCCTACACTACCCTCTTCCTTCCCCTCCACGTTTGCAACCTT
GTCGTCTTGCGCCCCTCCCCTCTTATCTTTATGCCCCCTTCCCACCTTTC
GAATCACCCCCACACGGGCATTTTTTTTTTCTACCTTTTATATTGTTTCT
TTCCCACCATAAAAAAAACTTCCGGTTTTTATTCGCACTCCCCCCTTCTT
GTTCCCTTTCCCCGCCCCCCCCATACCCTGTTCTCTTCGCCCTTCTTCAC
ATCCCACCCCCATGCGTTCGCTTTCTTCATTCGCTATTACACGCACTAAA
TTCTC

AAGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTCAAAGGGCACTGGGAACACTGTGCTTGGAA
GCTGACCTGGGTGTGAGTATGTCTGTACTGGTGGGTACTTGTGTGAAGGA
AGTAACTATCCCTACATGGCCAAGGAGCAGTGTCAGTCCTGAAGAGGTGT
TCTATTTCTATGCCATTGCAGGAGAGTAGTGGGGGTTGACACTTCTCTTT
CAAGGCTTGGCTTTCACTGTTTGCGACCCAAACTTTACTGCAGTTTTCTA
GCAGGCTCTATGCTCTTTCTCTGGGCCCAGTTTAGGAACCTGGTATCTCT
ACTTGACATTTCATGGTTCAATTCCCTGAGCACTTGCCACTATGAATAAG
TTAGCCTTCCTTTCCCATACCTGTTATTCCCACTCCCCATTCCTCTCTGC
AAACAGGTTGGGATTTGAAATTGCCACCAGATGGAAGAGCACCAGCTGCC
ATCAGCTGTTGGCAGCTTAGGAAACAGATCATGTTCAGCTTCCATCCTGC
AGGCAATGTTTAAAGATAAGAAGCCTAGGGTGGGTAGACTCAGTGGAAGG
AAGACTGAAAGGGAGTCATGGGCAAAGATGAGGTCAGTGTCTCAGCCACT
CAGTTACCAAGAGGCTCATCCAGTAGCCACCTAGGGCTCACATGCTTGCA
GCACTAGGN

Query= MSMg01no113_b21.g1 MSMg01no113_b21.g1 CHROMAT_FILE:
MSMg01no113_b21.g1 PHD_FILE: MSMg01no113_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:28 2005
         (550 letters)



>mm_chr1_196550199_196551148
          Length = 950

 Score = 1064 bits (550), Expect = 0.0
 Identities = 550/550 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcaaagggcactgggaacactgtgcttggaagctgacctgggtgtgagtatgtctgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcaaagggcactgggaacactgtgcttggaagctgacctgggtgtgagtatgtctgta 260

                                                                       
Query: 61  ctggtgggtacttgtgtgaaggaagtaactatccctacatggccaaggagcagtgtcagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggtgggtacttgtgtgaaggaagtaactatccctacatggccaaggagcagtgtcagt 320

                                                                       
Query: 121 cctgaagaggtgttctatttctatgccattgcaggagagtagtgggggttgacacttctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgaagaggtgttctatttctatgccattgcaggagagtagtgggggttgacacttctc 380

                                                                       
Query: 181 tttcaaggcttggctttcactgtttgcgacccaaactttactgcagttttctagcaggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcaaggcttggctttcactgtttgcgacccaaactttactgcagttttctagcaggct 440

                                                                       
Query: 241 ctatgctctttctctgggcccagtttaggaacctggtatctctacttgacatttcatggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctatgctctttctctgggcccagtttaggaacctggtatctctacttgacatttcatggt 500

                                                                       
Query: 301 tcaattccctgagcacttgccactatgaataagttagccttcctttcccatacctgttat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaattccctgagcacttgccactatgaataagttagccttcctttcccatacctgttat 560

                                                                       
Query: 361 tcccactccccattcctctctgcaaacaggttgggatttgaaattgccaccagatggaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccactccccattcctctctgcaaacaggttgggatttgaaattgccaccagatggaag 620

                                                                       
Query: 421 agcaccagctgccatcagctgttggcagcttaggaaacagatcatgttcagcttccatcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcaccagctgccatcagctgttggcagcttaggaaacagatcatgttcagcttccatcc 680

                                                                       
Query: 481 tgcaggcaatgtttaaagataagaagcctagggtgggtagactcagtggaaggaagactg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcaggcaatgtttaaagataagaagcctagggtgggtagactcagtggaaggaagactg 740

                     
Query: 541 aaagggagtc 550
           ||||||||||
Sbjct: 741 aaagggagtc 750


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)