TAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAAGGCCCATACCTAAACATGATAAAAAGCAATCTACAGCAAACCAGT
AGCCAACATCAAAGTAAATGGTGAGAAGCTGGAAGCAATTCCACTAAAAT
CAGGTACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATGGTA
CTTGAAGTCCTAGCCAGAGCAATTTGAGAACAAAAGGAGATCAGGGGGAT
ACAAATTGGAAAGGACGAAGTCAAAATATCACTTTTTGCAGATGATATGA
TAGTATATATACGTGATCCTAAAAATTCCACCAGTGAAGTCCTAAACCTG
ATAAACAGCTTCTATGAAGTAGCTGGATATAAAATTAACTCAAACAAGTC
AATGGCCTTTCTCTACACAAAGGATAAACAGGCTGAGAAAGAAATTAGGG
AAACAACACCCTTCACAATAGTCAAAATAATATAAAATACCTTGGCGTGA
CTCTAACTGAGGAAGTGAAAGATCTGTAGGATAAGAACTTCAAGTCTCTG
AAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATTTCCCATGCTC
ATGGATTGGCAGGATCAATATAGTAAAAATGGCTATCTTACCAAAAGCTA
TCTGCAGATTCAATGCAATTTCCATCAAATTTCCAACTCAATTCTTCAAC
GAATTAGAAAGAGC

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATGAATTCATGGAACAACTCATTGGGAACGAGT
GGAAAAGATTGTTGGAGCTATGGTAGTGTGCTTATGCCGACAGGGATTAT
TTATTTGAAATTTGTCATGCATGTTCCATGCGCATAGGTCTCTAATCTGT
CCTATATGTGCTGAGGCTGATACAAAGCATATTAAATCTACTCAAAAGAA
CTCCTTCTCTCTAAAGTGATTTCTAAACTGACCTTGGCCAGATTGTTCTG
AGTTTGTTGAGACCATTCAGTTGGTGGCAGCTCTTTGCTTGGGAGAAGAA
GCACAAAATAACCCCTGTGATGAGAACAATTCTGAGAAGCTGTCATAGGT
GCTGGGAGAGACAACTGGGAGTGACAACTGGAAAAGTCACTGGAGTGCCT
TGAAATACAAAGTTTCTGAGAAAGCAAGGTGTGAGTCACTCCTAGAAACC
ACTAAAGTTGTTAAAGGAGCTCTCTTACTCTCTTTAAGGTGTTTTATCTT
GATTCGTGGTTGTAGCTCAATATAGTATAACTGTTGATGCTTTAAAAGGC
TAAATTTGAAGGAAACGGTTTACTAAGATGTTCTAGAATGTATTAGCATG
CACTCTCACTACTGCAAGGGTCTGACATCATTGCCTCCTATGTCTTCCTA
TGAATAAAA

Query= MSMg01no113_d11.g1 MSMg01no113_d11.g1 CHROMAT_FILE:
MSMg01no113_d11.g1 PHD_FILE: MSMg01no113_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:35 2005
         (554 letters)



>mm_chr1_13969025_13969978
          Length = 954

 Score = 1048 bits (542), Expect = 0.0
 Identities = 551/554 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaattcatggaacaactcattgggaacgagtggaaaagattgttggagctatggtagt 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 atgaattcatggaacaactcattgggaatgagtggaaaagattgttggagctatggtagt 260

                                                                       
Query: 61  gtgcttatgccgacagggattatttatttgaaatttgtcatgcatgttccatgcgcatag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcttatgccgacagggattatttatttgaaatttgtcatgcatgttccatgcgcatag 320

                                                                       
Query: 121 gtctctaatctgtcctatatgtgctgaggctgatacaaagcatattaaatctactcaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctctaatctgtcctatatgtgctgaggctgatacaaagcatattaaatctactcaaaa 380

                                                                       
Query: 181 gaactccttctctctaaagtgatttctaaactgaccttggccagattgttctgagtttgt 240
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattccttctctctaaagtgatttctaaactgaccttggccagattgttctgagtttgt 440

                                                                       
Query: 241 tgagaccattcagttggtggcagctctttgcttgggagaagaagcacaaaataacccctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagaccattcagttggtggcagctctttgcttgggagaagaagcacaaaataacccctg 500

                                                                       
Query: 301 tgatgagaacaattctgagaagctgtcataggtgctgggagagacaactgggagtgacaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgatgagaacaattctgagaagctgtcataggtgctgggagagacaactgggagtgacaa 560

                                                                       
Query: 361 ctggaaaagtcactggagtgccttgaaatacaaagtttctgagaaagcaaggtgtgagtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggaaaagtcactggagtgccttgaaatacaaagtttctgagaaagcaaggtgtgagtc 620

                                                                       
Query: 421 actcctagaaaccactaaagttgttaaaggagctctcttactctctttaaggtgttttat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actcctagaaaccactaaagttgttaaaggagctctcttactctctttaaggtgttttat 680

                                                                       
Query: 481 cttgattcgtggttgtagctcaatatagtataactgttgatgctttaaaaggctaaattt 540
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 cttgattcgtggttgtagctcaatatagtataactgtttatgctttaaaaggctaaattt 740

                         
Query: 541 gaaggaaacggttt 554
           ||||||||||||||
Sbjct: 741 gaaggaaacggttt 754


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space:   513536
Effective search space used:   513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)