This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
MSMg01-113H22
Chromosome
1 (Build37)
Map Location
28,857,838 - 28,858,129
singlet/doublet
singlet
Overlap gene
LOC435614
Upstream gene
EG433281
,
EG665903
,
Gm597
Downstream gene
EG623924
,
EG433283
,
LOC100040665
Link
Open Mouse BAC browser
Click to get alignment info.
name
EG433281
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:433281
MGI:3646041
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs
name
EG665903
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:665903
MGI:3645212
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 44 ESTs, 2 Proteins
pseudo
: _no_value
name
Gm597
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:210962
MGI:2685443
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC435614
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:435614
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins
pseudo
: _no_value
name
EG623924
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:623924
MGI:3647053
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
name
EG433283
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:433283
MGI:3646042
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1509 ESTs, 4 Proteins
name
LOC100040665
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100040665
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins
name
Gm597
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:85719315
GeneID:210962
MGI:2685443
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: gene model 597, (NCBI)
transcript_id
: NM_001013750.1
name
EG623924
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:82878868
GeneID:623924
MGI:3647053
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
product
: predicted gene, EG623924
transcript_id
: XM_888439.1
name
EG433283
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:149233792
GeneID:433283
MGI:3646042
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1509 ESTs, 4 Proteins
product
: predicted gene, EG433283, transcript variant 1
transcript_id
: XM_484844.5
name
LOC100040665
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149233776
GeneID:100040665
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins
product
: similar to Electron transferring flavoprotein, alpha polypeptide
transcript_id
: XM_001475043.1
name
Gm597
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:85719316
GeneID:210962
MGI:2685443
definition
codon_start
: 1
product
: hypothetical protein LOC210962
protein_id
: NP_001013772.1
name
EG623924
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:82878869
GeneID:623924
MGI:3647053
definition
codon_start
: 1
product
: similar to cpn10 protein
protein_id
: XP_893532.1
name
EG433283
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:51704904
GeneID:433283
MGI:3646042
definition
codon_start
: 1
product
: hypothetical protein isoform 1
protein_id
: XP_484844.1
name
LOC100040665
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149233777
GeneID:100040665
definition
codon_start
: 1
product
: similar to Electron transferring flavoprotein, alpha polypeptide
protein_id
: XP_001475093.1
name
(CDS detail)
type
STS
link
xref
UniSTS:178365
definition
standard_name
: AI875557
name
(CDS detail)
type
STS
link
xref
UniSTS:255281
definition
standard_name
: Ddx3
name
(CDS detail)
type
STS
link
xref
UniSTS:237643
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:207141
definition
standard_name
: RH126997
name
(CDS detail)
type
STS
link
xref
UniSTS:224594
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:225035
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:493314
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:254591
definition
standard_name
: ORS_179
name
EG433281
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:149233775
GeneID:433281
MGI:3646041
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs
product
: predicted gene, EG433281
transcript_id
: XR_031985.1
name
EG665903
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:94363259
GeneID:665903
MGI:3645212
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 44 ESTs, 2 Proteins
product
: predicted gene, EG665903
pseudo
: _no_value
transcript_id
: XR_001800.1
name
LOC435614
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149233791
GeneID:435614
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins
product
: hypothetical LOC435614
pseudo
: _no_value
transcript_id
: XR_032225.1
clone name
MSMg01-356P06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-437B03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-440C09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-054P08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-137F19
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-065K17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-466B01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-068L02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-350D06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-460H09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-505G19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-055H22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-049A06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-419F23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-237C11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-385N18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-378L19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-535A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-067J04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-349B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-383C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-278D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-334K05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-309I04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-190B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-412M23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-111K18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-119F12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-532B21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-473N13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-279O15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-237D07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-299E10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-072J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-303F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-357E16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-403J18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-393H22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-107M02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-501L08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-111F24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-326K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331K16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-384J16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-407C13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-462O24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-511E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-532I07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-438O21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-210F03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-388G19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-510C20
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-456H07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-085L15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-309F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-085G11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-126H19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-364I18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-054E14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-418A21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-499L22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-052I19
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-113H22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-515N17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-461F19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-438J04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-075M16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-080A06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-233F14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-332K13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-110L23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-052E02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-316P15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-533J22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-543G22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-088O13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-450D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-326O12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-196C18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-376B16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-051M07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-441L10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-197F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-070K17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-075A13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-107C03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-232L23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482O21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-312J18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-369D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-083P12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-423D16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-458L19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-128K04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-365D15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-433H05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-266A22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-506A20
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-482N03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-348M22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-454A05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392A13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-086I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-086J13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-510A16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-288N03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-186D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-088O24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-280H04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087C05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-103J03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-026O01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-049N13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-235B10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-235K09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-299J08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-328C10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-001P01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-094B18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-263M02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-149E04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-182J13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-180C03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236E22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-050A24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-174C08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-205F08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-245I05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-214N03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-058N02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-202B20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-160C22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-243A06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-282P01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-272N13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-246A02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-146L01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-101J01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-127O15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-114M18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-164D06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-019K17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-134D21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-088P15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181A23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-309A11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-102O05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-165J08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005O01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-319L12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-158O14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-022L03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-271J05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-350D06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-155F09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-214M08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-008B03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-190F01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-121C02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-302M15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-263F24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-036H03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-171F09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-171H10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-142G07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-138P18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-161E13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-284M12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-123D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-158M17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-186G18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-304O19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-350C18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-350C19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-123N04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-337E06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-283A02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-327M03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-310B19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-036H15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-313P22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-105O18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-018N04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-011M22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-051P24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-112E21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-110I21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-026A04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-137B12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-149N02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-274L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057P22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-227N06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-166O08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-134A09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-161I03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-269L18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-324M23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-193N21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-013D22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-320N05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-223B21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-225G23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-200M10
singlet/doublet
doublet
plural/unique
unique