CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTATGCTGTGAAAATAATAACTATTAAATTATAATATTAATAAA
ACATTAGAAAATGTTCATAAAACTGATCATAGAAGGACATGAAATGCATA
ATAAATAACAAATCTATTTGTTATAGCAAATTACATGGAAATATGTTGGT
GAATTAGGGTGAATGATCATTTTTGTTTAAATAGAAACATCATGATTTTA
ACAGTAAATGTTGATGTTCTGGGGGGAAAAAAGGCTCCCTGTCTGGAAAA
AAACTGGAATGTTTTCTTCCTTTGTTAGTGACTTTATTCCAACAAACTGC
TGCCAGTGTTTTGCTACCAGACTGGTCACCCAAGAAATTCTAATTCTTTA
GTCAAGGAGAAGCTCACAAATTCCCTTTAGTGCCGCTAACAGACTTGCCT
TATCTAATTCTTCCTACTCTGCCCATGTCTTTTAAATGACTTCTAGTGGC
AGAAAGCATTGAGGTCCTCCTCCCAGGTCCCAGTGACTCACGTGCTGGCA
GTGGGCCAGAATGGACTTACTTTTGCTGCAGCCTAATAGATTGTTGACAT
CCAAGTGGCTTGCACCAGGAACACAAATGTCACATTTTGAGCCCGTGACA
AACTCTTTGCAGATACACTGGCCTGTGACTGCATCGCAAGTTCCATTCGA
GGCTCCTGCTACATGACAGTGACAAGGCCTGCATCTGAAGACCATATGG

TTTTCGATGTAGTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTTTAGATCCCTTCTTTTTTGTT
ACACTTTCATTAGACTCTTATTTTCATGAAGAAAAACACAAGAAAAGCCT
AAGAATTACATTTTNTCCTGTAGATGATCATGTGTGTGAGTATGTGATTG
TGTGTGTGTGTATGTATGCACATATGTGTGAATGTGTGTTTGTATGAGTG
TGATTATGTGTGCCTCTCTCTTTGAATGTCTCTTCGCTTCCCCTTCTTTC
TCTTTCTCCCCCCCCCCTCTTTCTTCTTTTTTTTTTTTCCTCCCTGATAA
TTCTTCTTCCTTCCCCTTATAACCTTTTCTCTCTCTCCTTTTCCTCACTC
GTTCTTTTCCTTTTCTTTTCTCCTCCTTCTCCCCCTTCCCATTTTTCTCC
TTCCCCGCTCCCTTCTTCTTTCTCTCCTTCCTCTTTCCCTTTCCTTTTTT
ATTCCTTTTTCCTTTTCTTTTTTCCCTCTTTTCCCCCCTTCTCTCCCCTT
ACTTTTCTATTATTTCTCCCTTTCCACCCTTTCTTCTTCCCTTCTTCCTT
TTTTTTCCTTTCTTCCTTCCTTCTTCTTTCCCCTATTCCCTTTTATCTCG
TTTCCTTCTTTAACTCTCCCTCGCCTTTTTCTTTCCGCCCATTCATTCCT
TATTTCCTCTTTCCCCCCTTTCTTCCCTTCCTCTCTCCCTCTCCTCTACT
TTTTCTTTTCCCCCCCTTCCATTCGCTTTTTCCCTA

Query= MSMg01no115_g17.b1 MSMg01no115_g17.b1 CHROMAT_FILE:
MSMg01no115_g17.b1 PHD_FILE: MSMg01no115_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:22 2005
         (539 letters)



>mm_chr1_190254480_190255418
          Length = 939

 Score =  944 bits (488), Expect = 0.0
 Identities = 524/536 (97%), Gaps = 2/536 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtatgctgtgaaaataataactattaaattataatattaataaaacattagaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gaattcagtatgctgtgaaaataataactattaaattataatattaataaaacattagaa 732

                                                                       
Query: 65  aatgttcataaaactgatcatagaaggacatgaaatgcataataaataacaaatctattt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aatgttcataaaactgatcatagaaggacatgaaatgcataataaataacaaatctattt 672

                                                                       
Query: 125 gttatagcaaattacatggaaatatgttggtgaattagggtgaatgatcatttttgttta 184
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 671 gttatagcaaattacatggaaatatgttggtgaactagggtgaatgatcatttttgttta 612

                                                                       
Query: 185 aatagaaacatcatgattttaacagtaaatgttgatgttctggggggaaaaaaggctccc 244
           |||||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||
Sbjct: 611 aatagaaacatcatgattttaacagtaaatgttgatgttctggggaaaaaaaaatctccc 552

                                                                       
Query: 245 tgtctggaaaaaaactggaa-tgttttcttcctttgttagtgactttattccaacaaact 303
           ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgtctgg-aaaaaactggaattgttttcttcctttgttagtgactttattccaacaaact 493

                                                                       
Query: 304 gctgccagtgttttgctaccagactggtcacccaagaaattctaattctttagtcaagga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 492 gctgccagtgttttgctaccagactggtcacccaagaaattctaattctctagtcaagga 433

                                                                       
Query: 364 gaagctcacaaattccctttagtgccgctaacagacttgccttatctaattcttcctact 423
           |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 432 gaagctcacagattccctttagtgccgttaacagacttgccttatctaattcttcctact 373

                                                                       
Query: 424 ctgcccatgtcttttaaatgacttctagtggcagaaagcattgaggtcctcctcccaggt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctgcccatgtcttttaaatgacttctagtggcagaaagcattgaggtcctcctcccaggt 313

                                                                   
Query: 484 cccagtgactcacgtgctggcagtgggccagaatggacttacttttgctgcagcct 539
           ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 312 cccagtgactcacatgctggcaatgggccagaatggacttacttttgctgcagcct 257


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space:   491441
Effective search space used:   491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)