XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGGAGTCC
ACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTATCTGATTT
AGGATAGGTAAATATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTAT
TGACGGTGTCCCTTCTTACTTTTCAAGGATTTCTTTCTCTTTCTTTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTGTTTTTGTTCTTGCTTTTGCCCTTGTCCCCCGCTCTTTTCTCAGCCT
CTCCCCCCTTCCCTAATTTCTCCTTCCCTTCTTCTCTCCTCCTTCCCCCT
TCCCCCCCTTTTTTCCCCCCTTTTCTCCCCCCCCTTCCCCCCCTTTTCTC
CTTATCTTTTTTTTTTTCCCTCCCCCCTTTATCTTCCTCTTTTCTTTATC
CTCCCGCTTTCCCTTCCTTTCTTCTCCCCTTTTTTCGCTCTTTTTTCTCC
CTTACTCCTTTTCCTCCACCCTTCCTCTCTCTCCCCCCCTCTTTTTCCCC
CCTTTAATTTTTTCTCTTTATTCTACACCTCCCCCCCTTTATCACACCTT
TTTTTCTTTTTTTCCCCCCTTTTTTCCCCGCCCCTTCTCCTCCCCCGCTT
TCCCCCTCCTCCCTTTTCTTCTCCCCCCTCTTTATG

CCCCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTATTAGAATTTTGACCCCAA
GGGTGGGAATGCCGGAAGCTTTAAAGAGTTGGGGGTAGCAGGAAGTAATT
TGGTCACTGAGGTATCTGCCCTTAAAAGAAATTGAAGGGTAGGCATGATG
GTGCATACTGTAATTCCAGACCCTGGAAAGTAGAGGCAGGAGGATCAGGA
TTTGAACGTCTTCCTCTGTTACATAGCAGGTTCAAGGCCAGCTTGGGCTA
CATAAGACCAAAGGATCAAAACCTAAAGGGAGCCGAAATAGTTTTGTGAG
ACCCTGGTTTATTCACAAAGGAGGTTTTTATGCATGAGCAACTGTGGTTG
GTGGTGTAGCTCAGGAGGCACGATGCTTGCCTAGCATCCTTAAAGCCCTA
GGTTTAATTCCTAGTATCACATAAACCGAACGTGGTGGTGTGCTACTGTA
ATCTACTAGTATAGTGGAGAGGACGGAAGAGCAGAAACTCAAGGACATCT
TCGGCTACATAACAAGCTTGAAGTCAGCCTGAGCTATGGGACATCCTCCC
CCCAACCCCTTGCATTCTTCGCTCCCCCCGTTCTCAAACAACATAACAAA
CTTGACTGCGCTGGTTAATACTGATTGTTACCCTGACAGGACCGGAATTC
TCCATAAATTAGTTCTCGATA

Query= MSMg01no115_o07.g1 MSMg01no115_o07.g1 CHROMAT_FILE:
MSMg01no115_o07.g1 PHD_FILE: MSMg01no115_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:58 2005
         (432 letters)



>mm_chr1_158114774_158115605
          Length = 832

 Score =  781 bits (404), Expect = 0.0
 Identities = 425/432 (98%), Gaps = 1/432 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtattagaattttgaccccaagggtgggaatgccggaagctttaaagagttgggggtag 60
           ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||
Sbjct: 201 agtattagaattttgaccccaagggtgggaatgtcagaagctttaacgagttgggggtag 260

                                                                       
Query: 61  caggaagtaatttggtcactgaggtatctgcccttaaaagaaattgaagggtaggcatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaagtaatttggtcactgaggtatctgcccttaaaagaaattgaagggtaggcatga 320

                                                                       
Query: 121 tggtgcatactgtaattccagaccctggaaagtagaggcaggaggatcaggatttgaacg 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 tggtgcatactgtaattccagaccctggaaagtagagacaggaggatcaggatttgaacg 380

                                                                       
Query: 181 tcttcctctgttacatagcaggttcaaggccagcttgggctacataagaccaaaggatca 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttcctcggttacatagcaggttcaaggccagcttgggctacataagaccaaaggatca 440

                                                                       
Query: 241 aaa-cctaaagggagccgaaatagttttgtgagaccctggtttattcacaaaggaggttt 299
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaacctaaagggagccgaaatagttttgtgagaccctggtttattcacaaaggaggttt 500

                                                                       
Query: 300 ttatgcatgagcaactgtggttggtggtgtagctcaggaggcacgatgcttgcctagcat 359
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ttatgcatgagcaactgtggttggtggtgtagctcaggaggcaggatgcttgcctagcat 560

                                                                       
Query: 360 ccttaaagccctaggtttaattcctagtatcacataaaccgaacgtggtggtgtgctact 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttaaagccctaggtttaattcctagtatcacataaaccgaacgtggtggtgtgctact 620

                       
Query: 420 gtaatctactag 431
           ||||||||||||
Sbjct: 621 gtaatctactag 632


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)