Query= MSMg01no116_d07.b1 MSMg01no116_d07.b1 CHROMAT_FILE:
MSMg01no116_d07.b1 PHD_FILE: MSMg01no116_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:24 2005
(597 letters)
>mm_chr1_81868032_81869028
Length = 997
Score = 1125 bits (582), Expect = 0.0
Identities = 591/594 (99%)
Strand = Plus / Minus
Query: 4 ggaattcagatacattccatgacctggcttggtgtatagtcgttaaacttaataaaatgg 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ggaattcagatacattggatgacctggcttggtgtatagtcgttaaacttaataaaatgg 738
Query: 64 ttaacaatcctttgacaattagaaattgatgggcatcatctggcaaaggcattatatgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttaacaatcctttgacaattagaaattgatgggcatcatctggcaaaggcattatatgct 678
Query: 124 aattcaatgtctgagacaagatgagagatgtttgtcacactaaaatacagtgtttagata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aattcaatgtctgagacaagatgagagatgtttgtcacactaaaatacagtgtttagata 618
Query: 184 taaagaaggaaaatgtctcaagtcaggacacttaaggttagtggtcagaatgatatttac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 taaagaaggaaaatgtctcaagtcaggacacttaaggttagtggtcagaatgatatttac 558
Query: 244 catgtctcaatatttatctgttatattgccatttttatgggatgggaaacaacctgtgtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 catgtctcaatatttatctgttatattgccatttttatgggatgggaaacaacctgtgtt 498
Query: 304 cttccaatgatgaataaggggaggcaatttatgttaagtatagtcttgtagatcacctgc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cttccaatgatgaataaggggaggcaatttatgttaagtatagtcttgtagatcacctgc 438
Query: 364 tcttcacaatgacataagttccaatgtcctttgggaagctcttctattactctgaatcac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tcttcacaatgacataagttccaatgtcctttgggaagctcttctattactctgaatcac 378
Query: 424 acaaataataattcctaataatagacagcatttattgattacatatcacaatatttaaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acaaataataattcctaataatagacagcatttattgattacatatcacaatatttaaag 318
Query: 484 cttgatgctttttttttaaatccctgttttcagcaatgtataatatcactatccctcaaa 543
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cttgatgccttttttttaaatccctgttttcagcaatgtataatatcactatccctcaaa 258
Query: 544 tgtaaaagatacattaaggataaacttagtttgtctgtattaatgtggtcagtt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgtaaaagatacattaaggataaacttagtttgtctgtattaatgtggtcagtt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_d07.g1 MSMg01no116_d07.g1 CHROMAT_FILE:
MSMg01no116_d07.g1 PHD_FILE: MSMg01no116_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:24 2005
(511 letters)
>mm_chr1_81741120_81742029
Length = 910
Score = 936 bits (484), Expect = 0.0
Identities = 505/512 (98%), Gaps = 3/512 (0%)
Strand = Plus / Plus
Query: 1 tgtgaccagaagatgtgaggcttggctggctgccaagaacaatagcgaccagtacaaaag 60
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 201 tgtgaccagaagatgtgaggcttggctggctgccaagaacaataacgagcagtacaaaag 260
Query: 61 gaaaaggtttgtagagacaaaagcactctatcacagagcaacccatagctttgctgtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaggtttgtagagacaaaagcactctatcacagagcaacccatagctttgctgtttg 320
Query: 121 aagtaatgaa-cccccaaatgaaagacccaactggattaacagcaggctgctcccctttt 179
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtaatgaaccccccaaacgaaagacccaactggattaacagcaggctgctcccctttt 380
Query: 180 accttctaacactgccctggctgataacttcctgttgacaccagaatgaagggagttctt 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 accttctaacactgccctggctggtaacttcctgttgacaccagaatgaagggagttctt 440
Query: 240 gtgccaacagcaagcagtgtctccatttggggactttctggctggtcacagaaaagcaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgccaacagcaagcagtgtctccatttggggactttctggctggtcacagaaaagcaac 500
Query: 300 ttggaagatttatgcccccatttgctttccatccatttttttttccattaaaggggggga 359
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 501 ttggaagatttatgcccccatttgctttccatccatttttttt-ccattaaagggggg-a 558
Query: 360 atttagagcaaagttacccatgtaactccaacccagtgctggagaagtcttcgctgactt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atttagagcaaagttacccatgtaactccaacccagtgctggagaagtcttcgctgactt 618
Query: 420 gcaaaatatcagcagaatcttgtgcccagtaggaacagaggtaaagtccataaaacttgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gcaaaatatcagcagaatcttgtgcccagtaggaacagaggtaaagtccataaaacttgt 678
Query: 480 gtgcagttcattccacgttgtatcaagcagtg 511
||||||||||||||||||||||||||||||||
Sbjct: 679 gtgcagttcattccacgttgtatcaagcagtg 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 910
Length adjustment: 10
Effective length of query: 501
Effective length of database: 900
Effective search space: 450900
Effective search space used: 450900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
