Query= MSMg01no118_i03.b1 MSMg01no118_i03.b1 CHROMAT_FILE:
MSMg01no118_i03.b1 PHD_FILE: MSMg01no118_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:23 2005
(191 letters)
>mm_chr1_69263480_69264069
Length = 590
Score = 346 bits (179), Expect = e-100
Identities = 188/191 (98%), Gaps = 1/191 (0%)
Strand = Plus / Minus
Query: 1 ccatttacttatagaaaatattcagagtcggataaatatctgtaggccctcagttctaat 60
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 390 ccatttacttatagaaaatattcagagt-ggataaatatctgtacgccctcagttctaat 332
Query: 61 agttgatttctacagaaaagatttccaagttggttcatactgataggtcccatcagatta 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 331 agttgatttctacagaaaagatttccaagttgtttcatactgataggtcccatcagatta 272
Query: 121 tcttatcaagaacacttctgcctaggaaactcaaaacaaatgcccaaatcagtggttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcttatcaagaacacttctgcctaggaaactcaaaacaaatgcccaaatcagtggttgca 212
Query: 181 aagcttataag 191
|||||||||||
Sbjct: 211 aagcttataag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 590
Length adjustment: 8
Effective length of query: 183
Effective length of database: 582
Effective search space: 106506
Effective search space used: 106506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no118_i03.g1 MSMg01no118_i03.g1 CHROMAT_FILE:
MSMg01no118_i03.g1 PHD_FILE: MSMg01no118_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:23 2005
(156 letters)
>mm_chr1_69117415_69117970
Length = 556
Score = 294 bits (152), Expect = 2e-84
Identities = 155/156 (99%)
Strand = Plus / Plus
Query: 1 cattcaaaaacaaaaaatcaacactgaaccaagaagacaaaagaatccacacccgaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattcaaaaacaaaaaatcaacactgaaccaagaagacaaaagaatccacacccgaaaaa 260
Query: 61 attcaatacatccatggaagttgagagagcggtattttttttagttcatgctacacatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcaatacatccatggaagttgagagagcggtattttttttagttcatgctacacatat 320
Query: 121 attcagtgacagaaacagatgttcaggaataaggtg 156
||||| ||||||||||||||||||||||||||||||
Sbjct: 321 attcactgacagaaacagatgttcaggaataaggtg 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
