Query= MSMg01no121_e02.b1 MSMg01no121_e02.b1 CHROMAT_FILE:
MSMg01no121_e02.b1 PHD_FILE: MSMg01no121_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:58 2005
(234 letters)
>mm_chr1_188699729_188700362
Length = 634
Score = 408 bits (211), Expect = e-118
Identities = 229/235 (97%), Gaps = 2/235 (0%)
Strand = Plus / Minus
Query: 1 tggatgtagtagttctggaatagttcaccgaaggacttcaccaacctcttcctgggaaag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 434 tggatgtagtagttctggaatagttcactgaaggacttcaccaacctcttcctaggaaag 375
Query: 61 cagtcacgccagacactgca-aacataaagcagatagggaaacactaattcaagcaaatc 119
|||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||
Sbjct: 374 cagtcacgccagacactg-agaacataaagcagatagggaaacactagttcaagcaaatc 316
Query: 120 tttgtagcttcgtaaacatcaagttctaatctccatcttgtttcagtatctctcttttgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tttgtagcttcgtaaacatcaagttctaatctccatcttgtttcagtatctctcttttgg 256
Query: 180 gaaccttcccttcattcccttcaggtctgtggttcctacggatggctgctaatag 234
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 255 gaaccttcccttcattccctccaggtctgtggttcctacggatggctgctaatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_e02.g1 MSMg01no121_e02.g1 CHROMAT_FILE:
MSMg01no121_e02.g1 PHD_FILE: MSMg01no121_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:58 2005
(250 letters)
>mm_chr1_188530643_188531292
Length = 650
Score = 433 bits (224), Expect = e-126
Identities = 245/258 (94%), Gaps = 10/258 (3%)
Strand = Plus / Plus
Query: 1 tttagggatgcatacatgtgt----------gtgtgtggggggggttatattcttactag 50
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 191 tttagggatgcatacatgtgtatgtgtgtgtgtgtgtggggggggttatattcttactag 250
Query: 51 agggagctgtaatgatatgtaatgatatagctggcatacattatatacagcaatgaacat 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agggagctgtaatgatatgtaatgatatagctggcatacattatatacagcaatgaacat 310
Query: 111 tattatttgtatttcacagacagggagactgaggccataggaagtgaggtctgttgttgc 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tattatttgtatttcacagacagggagactgaggccataggaagtgaggtctgttgttgc 370
Query: 171 acaaaacaggaaggggtgggtctggtttttgcagagagagcccgcccacctcctgggttc 230
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 371 agaaaacaggaaggggtgggtctgggttttgcagagagagcccgcccacctcctgggttc 430
Query: 231 tttcccaccttgtacttg 248
||||||||| ||||||||
Sbjct: 431 tttcccaccatgtacttg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
