Query= MSMg01no121_e21.b1 MSMg01no121_e21.b1 CHROMAT_FILE:
MSMg01no121_e21.b1 PHD_FILE: MSMg01no121_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:02 2005
(258 letters)
>mm_chr1_114814000_114814656
Length = 657
Score = 453 bits (234), Expect = e-132
Identities = 249/254 (98%), Gaps = 1/254 (0%)
Strand = Plus / Minus
Query: 5 gaattctaagttttcttcaattttttttaactttatcatttaatacctttattttttatt 64
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaattctaagttttgttcaa-tttttttaactttatcatttaatacctttattttttatt 399
Query: 65 tacataatggacaacattataaatccagaaaatatgaataatagtgtgtaatactataaa 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tacataatggacaacattacaaatccagaaaatatgaataatagtgtgtaatactataaa 339
Query: 125 ggagattgttacaaaatattacacaatgtaccaatatataaccataaccacaccgtcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 338 ggagattgttacaaaatattacacaatgtaccaatatataaccataaccacacagtcttt 279
Query: 185 atctttatacatactgatacatgtgcaaaatgaataagatttgcaagtgaatgacaaaca 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atctttatacatacagatacatgtgcaaaatgaataagatttgcaagtgaatgacaaaca 219
Query: 245 ctgaggcagtagtt 258
||||||||||||||
Sbjct: 218 ctgaggcagtagtt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 657
Length adjustment: 9
Effective length of query: 249
Effective length of database: 648
Effective search space: 161352
Effective search space used: 161352
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_e21.g1 MSMg01no121_e21.g1 CHROMAT_FILE:
MSMg01no121_e21.g1 PHD_FILE: MSMg01no121_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:02 2005
(283 letters)
>mm_chr1_114662022_114662700
Length = 679
Score = 458 bits (237), Expect = e-133
Identities = 270/283 (95%), Gaps = 4/283 (1%)
Strand = Plus / Plus
Query: 1 catggtggagaaggaactagcagctccaggaaaaacagacccagacgctgtgggggtgct 60
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 201 catggtggagaaggaactagcagctccaggaaaatcagacccagatgctgtgggggtgct 260
Query: 61 agctggagagagttgccagcaccaggagtttgggagcatgttccagccttgccatggagt 120
|||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 agctggagagagttaccagcagcaggagtttgggagcatgttccagccttgtcatggagt 320
Query: 121 tgaatcaggagcactggtgagttggagtgttctttccaaatatttcccacaacaccacta 180
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagcaggagcactggtgagttggtgtgttctttccaaatatttcccacaacaccacta 380
Query: 181 ttttatattctgttatttttcacagaggagataatactaggttagcaaacagaattgtaa 240
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttatattctgttatttttcggagaggagataatactaggttagcaaacagaattgtaa 440
Query: 241 aattgttttaataactatctgaaatgtccacaattgactgata 283
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 aattgttttaataact----gaaatgtccacaattgactgata 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 679
Length adjustment: 9
Effective length of query: 274
Effective length of database: 670
Effective search space: 183580
Effective search space used: 183580
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
