Query= MSMg01no125_b22.b1 MSMg01no125_b22.b1 CHROMAT_FILE:
MSMg01no125_b22.b1 PHD_FILE: MSMg01no125_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:03 2005
(526 letters)
>mm_chr1_122163093_122164018
Length = 926
Score = 928 bits (480), Expect = 0.0
Identities = 509/526 (96%), Gaps = 13/526 (2%)
Strand = Plus / Plus
Query: 1 gaattctaagaatcttgccctctgggaagcctcggggtatctggaaacaagattttgaga 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattctaagaatcttgttttctgggaagcctcggggtatctggaaacaagattttgaga 260
Query: 61 ggccagaagtaagaaggctgggcctcagggatggccctaaagtatccaggaagaaccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccagaagtaagaaggctgggcctcagggatggccctaaagtatccaggaagaaccagc 320
Query: 121 aagatggctcaaggagtaaaggcagttgccaacaagcctgagttcagcccccaaccccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagatggctcaaggagtaaaggcagttgccaacaagcctgagttcagcccccaaccccca 380
Query: 181 ggaccataaagtgaaaagttgtcctctgacctccatatgtgtactgttcaagcttgtgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaccataaagtgaaaagttgtcctctgacctccatatgtgtactgttcaagcttgtgca 440
Query: 241 cacacacaataaatgattttttttttcttaaaggtacagtgggttgaagaagcagagttc 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 cacacacaataaatgattttttttt-cttaaaggtacagtgggttgaagaagcagagttc 499
Query: 301 tgtgctctttgaggaatgaaatgctgctcttaagggtttccctgctctcccagtaaccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtgctctttgaggaatgaaatgctgctcttaagggtttccctgctctcccagtaaccca 559
Query: 361 gagctcccacaagcatcctgaacttcctctcggctaggggcttccactcccacctcctcc 420
||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 560 gagctcccacaagcatcctgaacttcctctcggctaggggcttcc------------tcc 607
Query: 421 accagctctctattttgtctgcttcagtgcctagatcctttctagcctccttcaagggcc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 608 accagctctctattttgtctgcttcagtgcctagatcctttctagcctccttcaaggggc 667
Query: 481 ccactgtccaaacatgtaccagcaaacacatttctgagttcctgtg 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ccactgtccaaacatgtaccagcaaacacatttctgagttcctgtg 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_b22.g1 MSMg01no125_b22.g1 CHROMAT_FILE:
MSMg01no125_b22.g1 PHD_FILE: MSMg01no125_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:03 2005
(429 letters)
>mm_chr1_122344366_122345194
Length = 829
Score = 619 bits (320), Expect = 0.0
Identities = 338/344 (98%)
Strand = Plus / Minus
Query: 1 catctggagaaagtgggagctgtgaaagtgacctctagtcatgaccctagtggaccagtg 60
||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||
Sbjct: 346 catctggagaaagtgggagctatgaaagtgacctctagccatgaccctagtagaccagtg 287
Query: 61 ctctttttgaacccctaacctttcctatgactctgtgccccttccacacttgagagtgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctctttttgaacccctaacctttcctatgactctgtgccccttccacacttgagagtgtc 227
Query: 121 ttcctcttctctgataaaggatctcagggctgggatggaggcttggttaaaagcacttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ttcctcttctctgataaaggatctcagggctgggatggaggcttggttaaaagcacttgt 167
Query: 181 tggtcttgcagagcaccagcattcagttcccatcatctacatctgggggcccaaacctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tggtcttgcagagcaccagcattcagttcccatcatctacatctgggggcccaaacctgc 107
Query: 241 ctctgactcctgctcctgagggatctgatgccctcttctggcctctatgggcgcccacac 300
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ctctgactcgtgctccagagggatctgatgccctcttctggcctctatgggcgcccacac 47
Query: 301 acatgtctgaatatacacttgtatacacatacttaacctataaa 344
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 46 acatgtctgaatatacacttgtagacacatacttaacctataaa 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
