Query= MSMg01no127_n05.b1 MSMg01no127_n05.b1 CHROMAT_FILE:
MSMg01no127_n05.b1 PHD_FILE: MSMg01no127_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:43 2005
(318 letters)
>mm_chr1_81268345_81269062
Length = 718
Score = 576 bits (298), Expect = e-169
Identities = 313/318 (98%)
Strand = Plus / Minus
Query: 1 caacttcctcaatgattccttgctccctccatatctcacacacactctctgtcacagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 caacttcctcaatgattccttgctccctccatatctcacacacactctctgtcacagaaa 459
Query: 61 atgctcctcctgccactcaaacttaaagtcatcattggatgctccaccatataagacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atgctcctcctgccactcaaacttaaagtcatcattggatgctccaccatataagacaaa 399
Query: 121 ccacattgtttatttagaaatcaaaccatggtgtggcaattaagtgcctatggctacaca 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 398 ccacattgtttatttagaaatcaaaccatggtgtggtaattaagtgcctatggttacaca 339
Query: 181 agttcattatctctacaaggggtaagctttcttctttactgagggaagcaagggtcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agttcattatctctacaaggggtaagctttcttctttactgagggaagcaagggtcttgc 279
Query: 241 tctctcagggaaggtcctttccatttcagtcaccagttggtctcacagcgatctttctca 300
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 278 tctctcagggaaggccctttccatttcagtcaccagttggtctcacagtgatctttctca 219
Query: 301 gttctgatcacttgaatg 318
||||||| ||||||||||
Sbjct: 218 gttctgagcacttgaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_n05.g1 MSMg01no127_n05.g1 CHROMAT_FILE:
MSMg01no127_n05.g1 PHD_FILE: MSMg01no127_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:43 2005
(443 letters)
>mm_chr1_81215510_81216348
Length = 839
Score = 814 bits (421), Expect = 0.0
Identities = 436/443 (98%), Gaps = 4/443 (0%)
Strand = Plus / Plus
Query: 1 ctatctccaaggtaacactaaagttttattggatgagaacagtttgtcttccttctgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatctccaaggtaacactaaagttttattggatgagaacagtttgtcttccttctgtga 260
Query: 61 gtctttttggtatttggaaagcatgatgagggcaaatttgcttgggaacattcagagtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctttttggtatttggaaagcatgatgagggcaaatttgcttgggaacattcagagtcg 320
Query: 121 cagaaatggaagaggcagtgcagatgccaattacattgagtgcctgtttgttctgtggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaaatggaagaggcagtgcagatgccaattacattgagtgcctgtttgttctgtggag 380
Query: 181 actgtacctgtgcagaagcccaaggtattatcccataccctgtttctgttaagacaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgtacctgtgcagaagcccaaggtattatcccataccctgtttctgttaagacaaatt 440
Query: 241 tcctctcaaactgaacttttcaagcaccacaatccggtttagtttgtgttcacaaagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctctcaaactgaacttttcaagcaccacaatccggtttagtttgtgttcacaaagcag 500
Query: 301 gctcagcttctacttgactgcatattttcccttgctttagttgtgacccaattattgttt 360
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 gctca----ctacttgactgcatattttcccttgctttagttgtgacaaaattattgttt 556
Query: 361 gaatggatagggtgcctggtaaccatataagacactcgaatatccactcatttaaataat 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 557 gaatggatagggtgcctggtaaccatataagacactcaaatatccactcatttaaataat 616
Query: 421 atttttgtattagccttaatgcc 443
|||||||||||||||||||||||
Sbjct: 617 atttttgtattagccttaatgcc 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 839
Length adjustment: 9
Effective length of query: 434
Effective length of database: 830
Effective search space: 360220
Effective search space used: 360220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
