Query= MSMg01no128_h12.b1 MSMg01no128_h12.b1 CHROMAT_FILE:
MSMg01no128_h12.b1 PHD_FILE: MSMg01no128_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:34 2005
(460 letters)
>mm_chr1_181332742_181333600
Length = 859
Score = 791 bits (409), Expect = 0.0
Identities = 442/453 (97%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 8 gaattctggagaccccgtggctgtcagcatctatgaaaacagcaaacatccagcttttgt 67
||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctggagacgcagtggctgccagcatctatgaaaacagcaaacatccagcttttgt 267
Query: 68 tccaacagactgaaatatctcacaactgagcctctcttccagtctttgcagtcttctctt 127
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 268 tccaactgactggaatatctcacaactgagcctctcttccagtctttgtagtcttctctt 327
Query: 128 gtggaggccaagtgtgtccctaagtctcagttatggtcaccagcactcaccagcactgcc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtggaggccaagtgtgtccctaagtctcagttatggtcaccagcactcaccagcactgcc 387
Query: 188 actcaccagcactgtcactctctgtacccagccttccaagaccaccgtggacaatctgcc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 actcaccagcactgtcactctctgtacccagccttccaagaccaccgtggacaatctgcc 447
Query: 248 agtgtgtcttctcttctcaatctcaggtctagtttctatttccatgtgaggggcctctga 307
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 448 agtgtgtcttctcttctcaaactcaggtc-agtttctatttccatgtgaggggcctctga 506
Query: 308 tatctgacctgggaaaaagaatctgtgcccctatatgtcgtggtactcaattttacaagc 367
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tatctgaactgggaaaaagaatctgtgcccctatatgtcgtggtactcaattttacaagc 566
Query: 368 aagatttacattcattgggatttattgggatataaatcacagggtaaacaccaaagatct 427
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 567 aagatttagattcattgggatttattgggatataaatcacaggggaaacaccaaagatct 626
Query: 428 atacactaatgctgttcatgtgtgtgcttatgt 460
|||||||||||||||||||||||||||||||||
Sbjct: 627 atacactaatgctgttcatgtgtgtgcttatgt 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 859
Length adjustment: 10
Effective length of query: 450
Effective length of database: 849
Effective search space: 382050
Effective search space used: 382050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_h12.g1 MSMg01no128_h12.g1 CHROMAT_FILE:
MSMg01no128_h12.g1 PHD_FILE: MSMg01no128_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:34 2005
(335 letters)
>mm_chr1_181462819_181463553
Length = 735
Score = 590 bits (305), Expect = e-173
Identities = 314/317 (99%)
Strand = Plus / Minus
Query: 19 gcctcctgagtgctaggattaaaggcatgtgttattaccagctcttgagaggagattaac 78
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 735 gcctcctgagtgctaggattaaaggcatgtgctattaccagctcttgagaggagattaac 676
Query: 79 actgacacttgtttaccaacttctcttataaaagtaatatgactggctcattgataaaac 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 actgacacttgtttaccaacttctcttataaaagtaatatgactggctcattgataaaac 616
Query: 139 taaggaaactaaattcacagttccaccttcctctacctcccgtgtgctgggatcaaaggc 198
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 taaggaaactaaattcacagttccaccttcctctacctcccgtgtgctgggatcaaaggt 556
Query: 199 gagcaccaccaccacccagcaatgctttgttttttgagaggggttttgttgtgtaacctc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gagcaccaccaccacccagcaatgctttgttttttgagaggggttttgttgtgtaacctc 496
Query: 259 agacttttcattctctcctctcagcttccttgagtgctatgattataaatgtgtatcacc 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agacttttcattctctcctctcagcttccttgagtgctatgattataaatgtgtatcacc 436
Query: 319 gggctggagagatggct 335
||||| |||||||||||
Sbjct: 435 gggctagagagatggct 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
