Query= MSMg01no128_n17.b1 MSMg01no128_n17.b1 CHROMAT_FILE:
MSMg01no128_n17.b1 PHD_FILE: MSMg01no128_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:05 2005
(364 letters)
>mm_chr1_156359496_156360259
Length = 764
Score = 665 bits (344), Expect = 0.0
Identities = 356/360 (98%)
Strand = Plus / Minus
Query: 5 gaattctttgtttccctttgtaccccatttttaaataggataacttgtttctctggggtc 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gaattctttgtttagctttgtaccccatttttaaataggataacttgtttctctggggtc 669
Query: 65 taatttttattcttacatttaatagacataatatttttgtcaaattgctctgattctgag 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 taatttttaatcttacatttaatagacataatatttttgtcaaattgctctgattctgag 609
Query: 125 agctttccatttctgagtgtatctcatcatggataggcaatgaagaaggaatatggcaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 agctttccatttctgagtgtatctcatcatggataggcaatgaagaaggaatatggcaac 549
Query: 185 atttttgtttcatagaatctgaacacactgtgaggagcctatctatcctgggcaggaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atttttgtttcatagaatctgaacacactgtgaggagcctatctatcctgggcaggaata 489
Query: 245 tatgagtagacttagttaacttgaaaagttttaaaaagtctcttcttgggtggagggtat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tatgagtagacttagttaacttgaaaagttttaaaaagtctcttcttgggtggagggtat 429
Query: 305 agtctaagatggcagccccctcatacttccaaaccagaaagaatgctgtacattagatcc 364
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 agtctaagatggcagctccctcatacttccaaaccagaaagaatgctgtacattagatcc 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_n17.g1 MSMg01no128_n17.g1 CHROMAT_FILE:
MSMg01no128_n17.g1 PHD_FILE: MSMg01no128_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:05 2005
(603 letters)
>mm_chr1_156169078_156170082
Length = 1005
Score = 1100 bits (569), Expect = 0.0
Identities = 584/589 (99%), Gaps = 2/589 (0%)
Strand = Plus / Plus
Query: 17 ggaattccctggagagtgacccctctgtgctttccacgtgtggctcagtaagcagttctc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ggaattccctggagagtgacccctctgtgctttccacgtgtggctcagtaagcagttctc 276
Query: 77 atggaaaatcagtcctcggtgttaatcttcacacagtgaggggcagttccttttcttatg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atggaaaatcagtcctcggtgttaatcttcacacagtgaggggcagttccttttcttatg 336
Query: 137 gtaaaagagagtgaaagagagatttttttttt-accttgtagtaaatattagcccgatgg 195
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 337 gtaaaagagagtgaaagagagatttttttttttaccttgtagtaaatattagcccgatgg 396
Query: 196 aagagataattaaaaaaaa-tcaaaacaattactgtctccttatataagacctgccatcc 254
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aagagataattaaaaaaaaatcaaaacaattactgtctccttatataagacctgccatcc 456
Query: 255 ttgacccattgccagtgacatgggtgacctcaatgtactcaacattataaaaggaaaaag 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttgacccattgccagtgacatgggtgacctcaatgtactcaacattataaaaggaaaaag 516
Query: 315 acaccccctttttacattccacttcagacaacctcaaacatgatgacgccggtttatggt 374
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 517 acaccccctttttacattccacttcagacaacctcaaacatgatgatgttggtttatggt 576
Query: 375 tatattaaagaatcagtgaaaaacaaaatagaatttttctcagctgccaaaagcgggaca 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tatattaaagaatcagtgaaaaacaaaatagaatttttctcagctgccaaaagcgggaca 636
Query: 435 caaaagagtagacctctatagttgactatgggaaagggacatctgatttatccctgtgag 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 caaaagagtagacctctatagttgactatgggaaagggacatctgatttatccctgtgag 696
Query: 495 tgttaaattaaaagacaaaattacttttattcatacctagtcttgcgggctgaaagcaaa 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tgttaaattaaaagacaaaattacttttattcatacctagtcttgcgggctgaaagcaaa 756
Query: 555 gcattctttagatgtggatagctccacactgtgagagaggagtctagct 603
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gcattctttagatgtggatagctccacactgtgagagaggagtctagct 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1005
Length adjustment: 10
Effective length of query: 593
Effective length of database: 995
Effective search space: 590035
Effective search space used: 590035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
