Query= MSMg01no130_h22.b1 MSMg01no130_h22.b1 CHROMAT_FILE:
MSMg01no130_h22.b1 PHD_FILE: MSMg01no130_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:18 2005
(707 letters)
>mm_chr1_60696493_60697599
Length = 1107
Score = 1207 bits (624), Expect = 0.0
Identities = 639/644 (99%)
Strand = Plus / Minus
Query: 64 agacaaacgtggttgatgcttgttggttggttggtacaacttcaccctatagtacttaaa 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 agacaaacgtggttgatgtttgttggttggttggtacaacttcaccctatagtacttaaa 1048
Query: 124 aggtgttacctacccttagtcccatcacttagtacacagaggcaggcagatctctgtgag 183
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 aggtggtacctacccttagtcccatcacttagtacacagaggcaggcagatctctgtgag 988
Query: 184 ttggacaccaacctggtctgtgtagtgagttctaagctagccagggctacctaacaaaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 ttggacaccaacctggtctgtgtagtgagttctaagctagccagggctacctaacaaaac 928
Query: 244 cctgttccgaagtaagaaaaagcattctccctatagaagtatgattatttacttcgtcaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 cctgttccgaagtaagaaaaagcattctccctatagaagtatgattatttacttcgtcaa 868
Query: 304 gtttatgtttctcaaatacaaatctcttaagacattgactttaatccccgcatgcccaca 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gtttatgtttctcaaatacaaatctcttaagacattgactttaatccccgcatgcccacg 808
Query: 364 tttgaaactaagcaaggaaagtccccagtgatcagcattcgtagataaaagctcacatct 423
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 807 tttgaaactaagcaaggaaagtccccagtgatcaacattcgtagataaaagctcacatct 748
Query: 424 agagggaattggcgacactttaaagatcagctgggaaccatttcataaatatgtgggaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 agagggaattggcgacactttaaagatcagctgggaaccatttcataaatatgtgggaag 688
Query: 484 tgttcttgtttgtaatctatatttcacttagggccacaagattgatagtggcaaggagtt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgttcttgtttgtaatctatatttcacttagggccacaagattgatagtggcaaggagtt 628
Query: 544 tgtggttaaaacctagtaaatgagcaatcaaatactgtggccagaagagaaaaagatgtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgtggttaaaacctagtaaatgagcaatcaaatactgtggccagaagagaaaaagatgtt 568
Query: 604 atactagaaaaaaatgcacaaaaggcataaataatatatcaagtaggtcactcaatatga 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atactagaaaaaaatgcacaaaaggcataaataatatatcaagtaggtcactcaatatga 508
Query: 664 gctactaagtctccaggagttattaaaatcctttgttatttatg 707
||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gctgctaagtctccaggagttattaaaatcctttgttatttatg 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 707
Length of database: 1107
Length adjustment: 10
Effective length of query: 697
Effective length of database: 1097
Effective search space: 764609
Effective search space used: 764609
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no130_h22.g1 MSMg01no130_h22.g1 CHROMAT_FILE:
MSMg01no130_h22.g1 PHD_FILE: MSMg01no130_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:18 2005
(666 letters)
>mm_chr1_60607058_60608123
Length = 1066
Score = 1257 bits (650), Expect = 0.0
Identities = 663/668 (99%), Gaps = 2/668 (0%)
Strand = Plus / Plus
Query: 1 cacttggaagactgaggcaggaggattggtgtgagcctcccaagagtccgagaccctatt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 199 cacttggaagactgaggcaggaggattggtgtgagcctcccaagagtctgagaccctatt 258
Query: 61 taaaaaaaaaaaaa--gtgattctcttgggactccactggacacttcatttcattcccct 118
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 taaaaaaaaaaaaaaagtgattctcttgggactccactggacacttcatttcattcccct 318
Query: 119 tacccctactataatgatgtattagacttcccatgccaagaatgaggagtgtagtgagct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tacccctactataatgatgtattagacttcccatgccaagaatgaggagtgtagtgagct 378
Query: 179 tttgtgcaaaagccttagttcccagaatttctagtgaaagcaagaacctgaaagtaactc 238
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tttgtgcaaaaggcttagttcccagaatttctagtgaaagcaagaacctgaaagtaactc 438
Query: 239 tatacagtttctatagaaagagaagttgaatatattacatgcatttctttatataaatga 298
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatacagtttctagagaaagagaagttgaatatattacatgcatttctttatataaatga 498
Query: 299 aaaatcttcatagtatgcttcagtactcttacaaatcatatacaatacttagtaaaataa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaaatcttcatagtatgcttcagtactcttacaaatcatatacaatacttagtaaaataa 558
Query: 359 tttctccaaaatctttattatatcctaagttgcctgctgtcataccagtttttattttaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tttctccaaaatctttattatatcctaagttgcctgctgtcataccagtttttattttaa 618
Query: 419 gaaaatttcctgtctctgctatcagtcctgtttcaaataaactcaatgcaaatgaaaaaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gaaaatttcctgtctctgctatcagtcctgtttcaaataaactcaatgcaaatgaaaaaa 678
Query: 479 gtaaaggaaaattaaatgtttctaagacaaacaataattgaagggatttgctatcagtag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gtaaaggaaaattaaatgtttctaagacaaacaataattgaagggatttgctatcagtag 738
Query: 539 aaatgcttcataagaaacattaaaggaatgtgatatagtcattcagttagattagtgaag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aaatgcttcataagaaacattaaaggaatgtgatatagtcattcagttagattagtgaag 798
Query: 599 gtataaattaaaacttcaacttttcttttttattatttgagataccttaatacaaaactg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gtataaattaaaacttcaacttttcttttttattatttgagataccttaatacaaaactg 858
Query: 659 gactgccc 666
||||||||
Sbjct: 859 gactgccc 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
