ACACATCAATAATTGCGGCGCTAAACGACTCCTATTCCAAGAGGAGCCGC
GGAATTCCTTGGTTTCGAAACCTTTGTACCTTTATCTCCAATTATTTATT
CACAGGGAGAAGCTGAGTGTAACCAGATCCGAGTTGTCTGTGTCCCTGTT
TGGAGATGGGGGAGGCAGGCTGGGGAGCAAAAGATACAGGGAAACAAACA
CAGAAAGGCTCTCTCAGGTATAGATGCCTCTTTGCTGTTCTCTATAGGCC
CCTTAAATCTAGTCAGTTTCAAATTCATACTACTACAGCCTAGGTCACTG
CCCAAGCCCGTTTCATGGGTTGGTAGTCAGTAAATTTTATCTCAGGTTAG
CTGAATTTAAATCAATACATTGGACACCATTTTGTTGCAGTAAATCTCCT
CCCAATTATGCCCTGGCAATGAAAGCATGACTTAGTTAATATGATTACAT
GTTGTGCACCTAGATTGGGCAGATCTACCTCTACACTGCCATCTTCCAGA
TCTATGAGACCCCTTAGAACTTGCGGTTTCTCCAGGCCATATGCTTCTGC
TTCCTCCTCCTCTGTGTCCTCTCCCTCTTCCATTTTCTCCTTCTCTCTCC
CACCTTCTGCTCCACCTTCCCTTTTATCTGCCCAATCATCAGCTCTCCTG
CATTTTACAAATTAAGGGTGGAAGCAGGTTTACAGGAAATCACCCTGAGT
GCTGACTCATTCCCTGTTCAAAACC

NCCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTAATCCAGGTAACAAGGCAGAA
AGTGAGGAGGCTACAGACCAAGAGAGATGAAGAGGTGAAGGAAATGGAGT
TGCTTTGCTTTGATGAATGTGCCTGAATGCCACCTGTGTCTCACCTTAAG
AAAGTGTTGATACATAAATAGTTAAGGTTGTCAACTATATAAAGAGAATA
ACTTCATGATATCCAACTGCTTGAACAAGGCATTGTGAGGTGCATGTTAT
GACTGTTTAACAATAGATATTCTTCTGAATTTATTTATTCAAGGATAAAT
TGAAGAAATTATATGGTTCAGCAAATTTGATACTTTTAGGATGAGAGCAT
TATATGACTGTCAAGGTCAGACTGTTGTGCTTTATAAAAATAAAAAGTAG
AGAAGGAATATGTTTGGTGGATATATAGTCAGGTGTGAGGAAATGGAGTG
CCTCTGTAGGCTCATGCTCAGACATCTGCTCCCCTTAAGGGAGCAGCTAT
ATGATGCTATAGTATAGAATAGAATAGAATAGTATAGTATAGTATAGTAT
AGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTATACTATACTAT
ACTATTTCATACCATAGTATACCATAGACGCTTATCTTAGTTCCTTTTCA
TTTACTATATTCCATCCTG

Query= MSMg01no131_n20.g1 MSMg01no131_n20.g1 CHROMAT_FILE:
MSMg01no131_n20.g1 PHD_FILE: MSMg01no131_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:13 2005
         (570 letters)



>mm_chr1_106375299_106376268
          Length = 970

 Score =  994 bits (514), Expect = 0.0
 Identities = 538/546 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtaatccaggtaacaaggcagaaagtgaggaggctacagaccaagagagatgaagaggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agtaatccaggtaacaaggcagaaagtgaggaggctacagaccaagagagatgaagaggt 487

                                                                       
Query: 61  gaaggaaatggagttgctttgctttgatgaatgtgcctgaatgccacctgtgtctcacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gaaggaaatggagttgctttgctttgatgaatgtgcctgaatgccacctgtgtctcacct 427

                                                                       
Query: 121 taagaaagtgttgatacataaatagttaaggttgtcaactatataaagagaataacttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 taagaaagtgttgatacataaatagttaaggttgtcaactatataaagagaataacttca 367

                                                                       
Query: 181 tgatatccaactgcttgaacaaggcattgtgaggtgcatgttatgactgtttaacaatag 240
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgatatccaaatgcttgaacaaggcattgtgaggtgcatgttatgactgtttaacaatag 307

                                                                       
Query: 241 atattcttctgaatttatttattcaaggataaattgaagaaattatatggttcagcaaat 300
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 306 atattcttctgaatttatttattcaaggataaattgaagaaatcatatggttcagcaaat 247

                                                                       
Query: 301 ttgatacttttaggatgagagcattatatgactgtcaaggtcagactgttgtgctttata 360
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgatgcttttaggatgagagcattatatgactgtcaaggtcagactgttgtgctttata 187

                                                                       
Query: 361 aaaataaaaagtagagaaggaatatgtttggtggatatatagtcaggtgtgaggaaatgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aaaataaaaagtagagaaggaatatgtttggtggatatatagtcaggtgtgaggaaatgg 127

                                                                       
Query: 421 agtgcctctgtaggctcatgctcagacatctgctccccttaagggagcagctatatgatg 480
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 126 agtgcctctgtaggctcatgctcaggcatctgctccccttaagggagcagctatatgatg 67

                                                                       
Query: 481 ctatagtatagaatagaatagaatagtatagtatagtatagtatagtatagtatagtata 540
            |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||
Sbjct: 66  gtatagtatagaatagaatagtatagtatagtatagtatagtatagaatagtatagaata 7

                 
Query: 541 gtatag 546
           ||||||
Sbjct: 6   gtatag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space:   537600
Effective search space used:   537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)