Query= MSMg01no132_g01.b1 MSMg01no132_g01.b1 CHROMAT_FILE:
MSMg01no132_g01.b1 PHD_FILE: MSMg01no132_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:52 2005
(661 letters)
>mm_chr1_102245593_102246655
Length = 1063
Score = 1180 bits (610), Expect = 0.0
Identities = 646/658 (98%), Gaps = 2/658 (0%)
Strand = Plus / Minus
Query: 6 gaattcacatcaatgaccgg-atacttagagaa-agatgcagagtttaaaggacaaagca 63
|||||||||||||||| || |||||||||||| |||||||||||||| |||||||||||
Sbjct: 863 gaattcacatcaatgaaaggtatacttagagaacagatgcagagtttagaggacaaagca 804
Query: 64 gtataagactctacatgaagttctccaagagagacataccagaaaattatacttgactcc 123
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 803 gtataagactctacatgaagttttccaagagagacataccagaaaattatacttgactcc 744
Query: 124 atgaggattgaagtgggggaatttagcagtaagtcatgtattgtgaatggacaagctggt 183
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 743 atgaggattgaagtgggggaatgtagcagtaagtcatgtattgtgaatggacaagctggt 684
Query: 184 aaagggtagtggtcagaaagtaagcaggacactgtggtcgggaatccaatgtgttggaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaagggtagtggtcagaaagtaagcaggacactgtggtcgggaatccaatgtgttggaat 624
Query: 244 gggagttggagtggaagagtagagaaggacatgattgtgagtgtacttattggccattgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gggagttggagtggaagagtagagaaggacatgattgtgagtgtacttattggccattgc 564
Query: 304 agggaacccttaccaaatgacagtaaccatttggatgatttttacatatacagattaata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agggaacccttaccaaatgacagtaaccatttggatgatttttacatatacagattaata 504
Query: 364 tttgaatgtgttgctagaacaataactatatttcattagtgataatacatagtcatttcc 423
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tttgaatgtgttgctagatcaataactatatttcattagtgataatacatagtcatttcc 444
Query: 424 acatgatatacacattatgcacaggcataattatggacagtatgacagtctaatatttcc 483
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acatgatatacacattatgcgtaggcataattatggacagtatgacagtctaatatttcc 384
Query: 484 tacaatacatgagaacacagaatttaaagatatctcacagtacatttccagaacaatggt 543
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 383 tacaatacatgagaacacagaatttaaagatatctcatagtacatttccagaacaatggc 324
Query: 544 ataattattctcacgcttatactcaaacacaggtgtattacatgtgcttaatgattgttg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ataattattctcacgcttatactcaaacacaggtgtattacatgtgcttaatgattgttg 264
Query: 604 tggaaaccacaataaagaaaagagtataaaccaacttcaacattaacaatcttttcgg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggaaaccacaataaagaaaagagtataaaccaacttcaacattaacaatcttttcgg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1063
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1053
Effective search space: 685503
Effective search space used: 685503
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_g01.g1 MSMg01no132_g01.g1 CHROMAT_FILE:
MSMg01no132_g01.g1 PHD_FILE: MSMg01no132_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:53 2005
(631 letters)
>mm_chr1_102087360_102088390
Length = 1031
Score = 1118 bits (578), Expect = 0.0
Identities = 617/630 (97%)
Strand = Plus / Plus
Query: 1 ctgggtgtctgggttctgctggtcccagttacttcctgtgttggggcagatactgtgtcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ctgggtgtctgggttctgctggtcccagttacttcctgtgttggggcagatattgtgtcc 260
Query: 61 ttctcacttctgatcctatgatcctgggcctgttagagctcctgggaatgtattttcctc 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctcacctctgatcctatgatcctgggcctgttagagctcctgggaatgtattttcctc 320
Query: 121 taggtgttgtgggacaggctctgatccttatgtcctgggcgtgttagagtgcctgggagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggtgttgtgggacaggctctgatccttatgtcctgggcgtgttagagtgcctgggaga 380
Query: 181 agagttacttctgtgtgttgtgggattggctgcagaattagcgcccaaggtctgctcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagttacttctgtgtgttgtgggattggctgcagaattagcgcccaaggtctgctcagg 440
Query: 241 gcacctctgatcctatgatcctgggcatgttagagctgctagattcggtttcttaagaaa 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacctttgatcctatgatcctgggcatgttagagctgctagattcggtttcttaagaaa 500
Query: 301 gagtattcttccaaatatagaattggcctaaaatattgaaaaaaaatggaagtccaataa 360
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 gagtattcttccaaatatagaattggtctaaaatattgaaaaaaaatggaagtccaatag 560
Query: 361 catggaccagaaacatatggcagtttctggctcattctgtcctccctacctttttctctg 420
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||
Sbjct: 561 catggaccagaaacatatggcagtatctggctcattctgtcctccctagctttttttctg 620
Query: 421 ttcatatactgggggattatcatgtaaacaatcattctcttccagttattcctgatgatg 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 ttcatatactgggggattatcatgtaaacaatcattctcttccagttatttctgatgatg 680
Query: 481 gtagggttccaatctttctctgtaacttttttaaatatgtcaatattttaaaaatatttt 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtggggttccaatctttctctgtaacttttttaaatatgtcaatattttaaaaatatttt 740
Query: 541 atttttactttgatgtattgcatatgcatctgtgtatgggaaactctatccactggcaga 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 741 atttttactttgatgtattgcatatgcatctgtgtatgggaaactctatccactggaaga 800
Query: 601 aagttagaggttatgaggagcctggtgtgg 630
||||||||| ||||||||||||||||||||
Sbjct: 801 aagttagagtttatgaggagcctggtgtgg 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
