Query= MSMg01no132_h17.b1 MSMg01no132_h17.b1 CHROMAT_FILE:
MSMg01no132_h17.b1 PHD_FILE: MSMg01no132_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:00 2005
(294 letters)
>mm_chr1_93155932_93156625
Length = 694
Score = 557 bits (288), Expect = e-163
Identities = 291/292 (99%)
Strand = Plus / Plus
Query: 1 aatagcatacattacttagctgagctaagtaatgtactttgtattattactatgtactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagcatacattacttagctgagctaagtaatgtactttgtattattactatgtactgt 260
Query: 61 tactttgtaccctttgtcattgccctcatcccttgtcaccatttggtttctgggtattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactttgtaccctttgtcattgccctcatcccttgtcaccatttggtttctgggtattca 320
Query: 121 gtttgttccttctctgtcgggcttatttccgtagcatgatgtcctttgctccatcacgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttgttccttctctgtcgggcttatttccgtagcatgatgtcctttgctccatcacgtt 380
Query: 181 gtcacaaatggcaggctcatctctgctaatgctgaatagtgtttcttacacatctcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcacaaatggcaggctcatctctgctaatgctgaatagtgtttcttacacatctcagtt 440
Query: 241 tcttctttcattactcagtttatacttgggccgattccatatcttggctatc 292
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttcattcattactcagtttatacttgggccgattccatatcttggctatc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no132_h17.g1 MSMg01no132_h17.g1 CHROMAT_FILE:
MSMg01no132_h17.g1 PHD_FILE: MSMg01no132_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:00 2005
(293 letters)
>mm_chr1_93329824_93330520
Length = 697
Score = 501 bits (259), Expect = e-146
Identities = 283/293 (96%), Gaps = 4/293 (1%)
Strand = Plus / Minus
Query: 1 tctctctgtatacctgcctggccttgaactcacagagatccacctgcctctctgcctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tctctctgtatacctgcctggccttgaactcacagagatccacctgcctctctgcctctc 517
Query: 61 aaatgttgggattcaaggcatgcatgtgcctgcctgtaccacctaaacatattcacttta 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 516 aagtgttgggattcaaggcatgcatgtgcctgcctgtaccacctaaacatattcgcttta 457
Query: 121 atggcatctccttggtggccgcatgctagaggttaggacactgtgaatgaaggccagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atggcatctccttggtggccgcatgctagaggttaggacactgtgaatgaaggccagaca 397
Query: 181 actcggggttcaagctcccctgcaattgtcttctctaggtaaccttgggcaggctgagac 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actccgggttcaagctcccctgcaattgtcttctctaggtaaccttgggcaggctgagac 337
Query: 241 cac----tgagcttttcttgtggtgacctcttctacacctttctatgtgcttt 289
||| ||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 336 cactgtttgagcttgacgtgtggtgacctcttctacacctttctatgtgcttt 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 697
Length adjustment: 9
Effective length of query: 284
Effective length of database: 688
Effective search space: 195392
Effective search space used: 195392
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
