Query= MSMg01no132_j23.b1 MSMg01no132_j23.b1 CHROMAT_FILE:
MSMg01no132_j23.b1 PHD_FILE: MSMg01no132_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:11 2005
(602 letters)
>mm_chr1_191989370_191990370
Length = 1001
Score = 1135 bits (587), Expect = 0.0
Identities = 597/601 (99%), Gaps = 3/601 (0%)
Strand = Plus / Minus
Query: 3 gaattcaggctggttttc-aaatgacttaaactattgttgatgctgtcactcaaaactac 61
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaattcaggctggttttcaaaatgacttaaactattgttgatgctgtcactcaaaactac 742
Query: 62 atgactagcttaaatcattagaaccctccccccttaaaaagaaataaaatcaagttattt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgactagcttaaatcattagaaccctccccccttaaaaagaaataaaatcaagttattt 682
Query: 122 cttcaaataattttatcaacctggacagatagctgagtaactctggtaggaagtcatgcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttcaaataattttatcaacctggacagatagctgagtaactctggtaggaagtcatgcc 622
Query: 182 agccttacactccccatgcctcataaaagatttctctgaactatctggataattaccata 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agccttacactccccatgcctcataaaagatttctctgaactatctggataattaccata 562
Query: 242 atgaaacacttctttgtctagaatctgggctccagatagatgtagtaaaagttacacacc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgaaacacttctttgtctagaatctgggctccagatagatgtagtaaaagttacacacc 502
Query: 302 ccctccccaaaataagttctttattaaagttgagccctgcaccactttacttcgtattgc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctccccaaaataagttctttattaaagttgagccctgcaccactttacttcgtattgc 442
Query: 362 tgtgtttctttgaaaaattccttactgaaaaactgttttgtttggctttttgtttttttc 421
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 --tgtttctttgaaaaattctttactgaaaaactgttttgtttggctttttgtttttttc 384
Query: 422 tttttgtttttgttatttaacaaaaacatgaagtcaaaagtaccctctgcatggatcttc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttttgtttttgttatttaacaaaaacatgaagtcaaaagtaccctctgcatggatcttc 324
Query: 482 tttgtgagacagggtgtgggtttcaggaggactcttttggagcagttaaatctgaagtgc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttgtgagacagggtgtgggtttcaggaggactcttttggagcagttaaatctgaagtgc 264
Query: 542 tcacgtcttgagttgctctcctgctccccctccccagcagtggcatctgctgcttcatgc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcacgtcttgagttgctctcctgctccccctccccagcagtggcatctgctgcttcatgc 204
Query: 602 t 602
|
Sbjct: 203 t 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1001
Length adjustment: 10
Effective length of query: 592
Effective length of database: 991
Effective search space: 586672
Effective search space used: 586672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_j23.g1 MSMg01no132_j23.g1 CHROMAT_FILE:
MSMg01no132_j23.g1 PHD_FILE: MSMg01no132_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:11 2005
(238 letters)
>mm_chr1_191868468_191869105
Length = 638
Score = 395 bits (204), Expect = e-114
Identities = 228/236 (96%)
Strand = Plus / Plus
Query: 1 tagctagaggcgtagggaaagttgcctagagcatttcaccaggccccacggtcgctcaca 60
||||||||||||||||||||||||||||| |||||||| ||||||| || | ||||||||
Sbjct: 201 tagctagaggcgtagggaaagttgcctagcgcatttcatcaggccctacagacgctcaca 260
Query: 61 tacccgggcagggatcaagcactgagagcacacacagccttgcccatgggcatttctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacccgggcagggatcaagcactgagagcacacacagccttgcccatgggcatttctgcc 320
Query: 121 cggggacagttagaagggctctcacctctactcacaccagcttactttcaggaaccactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tggggacagttagaagggctctcacctctactcacaccagcttactttcaggaaccgctg 380
Query: 181 gaagtggcagggtggccctgcatgtctccttcacaaagcttccatggggtcactgg 236
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 gaagtggcagggtggccctgcatgtctccttcacaaagcttccacggggtcactgg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
