Query= MSMg01no132_l15.b1 MSMg01no132_l15.b1 CHROMAT_FILE:
MSMg01no132_l15.b1 PHD_FILE: MSMg01no132_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:19 2005
(504 letters)
>mm_chr1_82861431_82862334
Length = 904
Score = 915 bits (473), Expect = 0.0
Identities = 496/505 (98%), Gaps = 4/505 (0%)
Strand = Plus / Plus
Query: 4 tcctaagtctcctgttgtgtcacatggtttcatggcaggattatagatctgtgtctcgtc 63
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 204 tcctaagtctcctgttgtgtcacatggtttcatggcagggttatagatctgtgtctcgtc 263
Query: 64 tgacagacaagcttctggctcttttcactcagctgtctatgctttaattcttgataacac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgacagacaagcttctggctcttttcactcagctgtctatgctttaattcttgataacac 323
Query: 124 attagaaaaagcaaaatgttacgatggaatataggactggagagatagctcagtggttaa 183
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attagaaaaagcaaaatgttaagatggaatataggactggagagatagctcagtggttaa 383
Query: 184 gagcactgactgctcttccagaggtcctgagttcaattcccagtggctcaaaccatctgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagcactgactgctcttccagaggtcctgagttcaattcccagtggctcaaaccatctgt 443
Query: 244 aaaggtatctaatgccctcttctggtacagctacagtgtactcatataatcaaacaaaca 303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaagggatctaatgccctcttctggtacagctacagtgtactcatataatcaaacaaaca 503
Query: 304 aaaaagtgaatacatctttttttttttaaaa--gcattaagaaagatgaaatataatggt 361
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 504 aaaaagtgaatacatctttttttttttaaaaaagcattaagaaagatgaaatataatggt 563
Query: 362 tttaaaagtgtgtataaacaaatacagaactgttaattctttttgcatgagacgtggata 421
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 564 tttaaaagtgtgtataaacaaatacagaactgttaattctttttgcatgagacatggata 623
Query: 422 atggtggttgtttttt--atctcggcaagcatagttcattttatatatcatttagatact 479
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 624 atggtggttgttttttttatcttggcaagcatagttcattttatatatcatttagatact 683
Query: 480 cttatcactgagaaatatgtatcag 504
|||||||||||||||||||||||||
Sbjct: 684 cttatcactgagaaatatgtatcag 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_l15.g1 MSMg01no132_l15.g1 CHROMAT_FILE:
MSMg01no132_l15.g1 PHD_FILE: MSMg01no132_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:19 2005
(292 letters)
>mm_chr1_82991969_82992660
Length = 692
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 1 agcttccaaaccatcacttcggttccatccgatcatgacccagactggaatagaaagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agcttccaaaccatcacttcggttccatccgatcatgacccagactggaatagaaagcta 433
Query: 61 tctcatgcatttattcagtgtaacatggacatttcttcatactactagtcagttagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tctcatgcatttattcagtgtaacatggacatttcttcatactactagtcagttagacat 373
Query: 121 tcatcgtattggaaaatgcataaaattcaacaaaatgctgcaatctccacttttaggtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcatcgtattggaaaatgcataaaattcaacaaaatgctgcaatctccacttttaggtac 313
Query: 181 ccagtgatggtacctagctctccaaaccctcctctatagctttatagccaacagcttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ccagtgatggtacctagctctccaaaccctcctctatagctttatagccaacagcttatt 253
Query: 241 tggaaaattaggaagaagtgacaggttatgaaggctgtgaactactgttgtc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tggaaaattaggaagaagtgacaggttatgaaggctgtgaactactgttgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
