Query= MSMg01no134_a10.b1 MSMg01no134_a10.b1 CHROMAT_FILE:
MSMg01no134_a10.b1 PHD_FILE: MSMg01no134_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:01 2005
(264 letters)
>mm_chr1_73423104_73423766
Length = 663
Score = 464 bits (240), Expect = e-135
Identities = 258/264 (97%), Gaps = 1/264 (0%)
Strand = Plus / Plus
Query: 1 gctatcttactgaggcgggtgttgaaaggttgagaatgaggatgagagacctctgtgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 gctatcttactgaggcgggtgttgaaaggttgagaatgaggatgagagatgt-tgtgaga 259
Query: 61 atccatccccctacctggaagaaagggctggagtgagctatctagcccagctggtgcttg 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 260 atccatccccctacctggaagaaagggctggagtgagccatctagcccagctggtgcttg 319
Query: 121 gacatgggattgtttcatcctcagaggatggagggacaggaaagagaaaagggatacggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gacatgggattgtttcatcctcagaggatggagggacaggaaagagaaaagggatacggg 379
Query: 181 taaaagcttgtcctaaaggccttggagaggagggtgcagcaaataagggtggatatgagc 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 380 taaaagcttgtcctaaaggccttggagaggagggtgcggcaaataagggtggatatgagc 439
Query: 241 catgtagaagtgtctgggtagcta 264
||||||||||| ||||||||||||
Sbjct: 440 catgtagaagtttctgggtagcta 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 663
Length adjustment: 9
Effective length of query: 255
Effective length of database: 654
Effective search space: 166770
Effective search space used: 166770
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no134_a10.g1 MSMg01no134_a10.g1 CHROMAT_FILE:
MSMg01no134_a10.g1 PHD_FILE: MSMg01no134_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:01 2005
(408 letters)
>mm_chr1_73591297_73592105
Length = 809
Score = 600 bits (310), Expect = e-176
Identities = 385/412 (93%), Gaps = 7/412 (1%)
Strand = Plus / Minus
Query: 1 ctgctcaatcgtcagcactttttcctcttc--cctcacctctctgtgtgggattgcagtc 58
||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 480 ctgctcaattgtcagcactttttcctcttctgcc-cacctctctgtgtgggattgcagtc 422
Query: 59 tgccaggactggcctcatgaacagagccatctctgcttgggtcctcaggttctactgtct 118
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgccaggactggcctcattaacagagccatctctgcttgggtcctcaggttctactgtct 362
Query: 119 atcctactggatggaatgctgacagcttataacactcactgctgctgtacactaaggctc 178
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 atcctactggatgggatgctgacagcttatatcactcactgctgctgtacactaaggctc 302
Query: 179 tacagggaaggagcagtggtctatgggtgaagttgtcatgtcaaggggacagagtgtggc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 tacagggaaggagcagtggtctatgggtgaagttgtcatgtcaaggggacagagtatggc 242
Query: 239 tgaaaggctgaggtttaaacgtcgttagaagagatcctttgatatataattatatatata 298
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 241 tgaaaggctgaggtttaaacgttgttagaagagatcctttgatatataat--tatatata 184
Query: 299 tatatatataattcttacatattctttgatatataaatacataca--tacatatatatat 356
||||||||||||||||| ||||||||||||||||| ||||||| | || ||||||||||
Sbjct: 183 tatatatataattcttatatattctttgatatatacatacatatatgtatatatatatat 124
Query: 357 gtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatatgtaaga 408
||| ||| ||| ||| ||| ||| ||| || |||||||||||||||||||
Sbjct: 123 atatatatatatatatatatatatatatacatatatgtatgtatatgtaaga 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 809
Length adjustment: 9
Effective length of query: 399
Effective length of database: 800
Effective search space: 319200
Effective search space used: 319200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
