Query= MSMg01no134_c10.b1 MSMg01no134_c10.b1 CHROMAT_FILE:
MSMg01no134_c10.b1 PHD_FILE: MSMg01no134_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:16 2005
(630 letters)
>mm_chr1_177466504_177467533
Length = 1030
Score = 1112 bits (575), Expect = 0.0
Identities = 617/631 (97%), Gaps = 2/631 (0%)
Strand = Plus / Plus
Query: 1 cacacacaaacacaataaaaataggaataaatcctaactttaagaaagagttctggtaat 60
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 201 cacacacaaacacaataaaaatagaaataaatcttaactttaagaaagagttctggtaat 260
Query: 61 ctcatgccacacattttacttcttgcttatgaatggaaattgtttcatggcctattttgg 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcataccacacattttacttcttgcttatgaatggaaattgtttcatggcctattttgg 320
Query: 121 catacctacatagaatgaaattagcaaaacatctcttctggaatcataattataggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catacctacatagaatgaaattagcaaaacatctcttctggaatcataattataggagtt 380
Query: 181 gaatcccaaccctaccacataaaaaaatttataagatgttggatgaaaatcatttcatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatcccaaccctaccacataaaaaaatttataagatgttggatgaaaatcatttcatat 440
Query: 241 gtctgggcttccgttttcttttctttttttataaagttagagtgttttaagtgacaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctgggcttccgttttcttttctttttttataaagttagagtgttttaagtgacaatta 500
Query: 301 tacataaaaagcacttagaccattaagtcttatccctcacaggcaaaggactagccatgt 360
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacataaaaagcacttagaccaggaagtcttatccctcacaggcaaaggactagccatgt 560
Query: 361 gccagggcttcctttagcataaaacagaagctcatttttagtgacttcattacacttagt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccagggcttcctttagcataaaacagaagctcatttttagtgacttcattacacttagc 620
Query: 421 cttttttgcctcccatccctactt-cttcactcctccacaaaagaagtcagagaactttt 479
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 cttttttgcctcccatccctactttcttcactcctccacaaaagaagtcagagaactttt 680
Query: 480 ccataaatattctgtatataaatctccacatgagggtcttggaagcccaagtcagtggaa 539
||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct: 681 ccataaatattctgtatataaatctacacatgagggtcttagaagcctgagtcagtggaa 740
Query: 540 tccatttccactggtcttaaatccactggatttagaatctgcagtctgtttcttactgca 599
| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 741 ttcatttccactggttttaaatccactggatttagaatctg-agtctgtttcttactgca 799
Query: 600 aacgttgttttttgaacctgccaggatgaac 630
|||||||||||||||||||||||||||||||
Sbjct: 800 aacgttgttttttgaacctgccaggatgaac 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_c10.g1 MSMg01no134_c10.g1 CHROMAT_FILE:
MSMg01no134_c10.g1 PHD_FILE: MSMg01no134_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:17 2005
(676 letters)
>mm_chr1_177612977_177614058
Length = 1082
Score = 944 bits (488), Expect = 0.0
Identities = 519/533 (97%), Gaps = 6/533 (1%)
Strand = Plus / Minus
Query: 1 taagactagntaggtatctggatggaagtccttagaagctgctcataggaccactgcatt 60
||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 533 taagactagctaggtatctggatggaagtatttagaagctgctcataggaagactgcatt 474
Query: 61 agtatagagataggtactaggtccacttttcatcaagtaatgcagtttatttgtaaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agtatagagataggtactaggtccacttttcatcaagtaatgcagtttatttgtaaatga 414
Query: 121 aactgttaagcataaacgtaataagactatgatttttaccctagtcatggtgccaggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aactgttaagcataaacgtaataagactatgatttttaccctagtcatggtgccaggaat 354
Query: 181 gttctggcagtgaacattgacaagttacattaaccaaacttaaactgaaa------aaac 234
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 353 gttctggcagtgaacattgacaagttacattaaccaaacttaaactgaaaaaccataaaa 294
Query: 235 ataaaaataaacaaggacagaaggtggaataaaaaagcagttgctatttcgtagagtttt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ataaaaataaacaaggacagaaggtggaataaaaaagcagttgctatttcgtagagtttt 234
Query: 295 ttgttttgtttttgtttttaatttttactttagtttagtttttcaagacggggtttctct 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ttgttttgtttttgtttttaatttttactttagtttagtttttcaagacggggtttctct 174
Query: 355 gtgtaaccctggctgtcctggagctctgtagaccaggctggcctcaaactctaggagagc 414
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 173 gtgtaaccctggctgtcctggagctctatagaccaggctggcctcaaactctaggagagc 114
Query: 415 tgcctgcctctgcctcccaagtgctggcattaaaggtgtgtgcttggcttgtttttatta 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tgcctgcctctgcctcccaagtgctggcattaaaggtgtgtgcttggcttgtttttatta 54
Query: 475 atatttttaagtgggtgcaaattctttaggcttcctgttcttcttgtgcatag 527
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 53 atatttttaagtgggtgcaaaatctttaggcttcctgttcttcttgtgcatag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1082
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1072
Effective search space: 713952
Effective search space used: 713952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
