Query= MSMg01no135_e07.b1 MSMg01no135_e07.b1 CHROMAT_FILE:
MSMg01no135_e07.b1 PHD_FILE: MSMg01no135_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:21 2005
(637 letters)
>mm_chr1_97895131_97896164
Length = 1034
Score = 1152 bits (596), Expect = 0.0
Identities = 624/634 (98%), Gaps = 5/634 (0%)
Strand = Plus / Minus
Query: 5 gaattcagcatctccgcaggtaaagaaaataaaaattttcaaatacaagttgtatccttc 64
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 834 gaattcagcatctctgcaggtaaagaaaacaaaaattttcaaatacaagttgtatccttc 775
Query: 65 ttgggaggtatacatacactagagttccacattttaaaaaaaaatcatttcattcattaa 124
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 774 ttgggaggtatacatacactagagttccaca--ttaaaaaaaaatcatttcattcattaa 717
Query: 125 acatgtaacgaagaaatttgaatgtatttcccaaatattattccccaaaatactgtgata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 acatgtaacgaagaaatttgaatgtatttcccaaatattattccccaaaatactgtgata 657
Query: 185 tatgttgcattctttaaattatgtctctgattatatattgaaatatgccattaagtatac 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tatgttgcattctttaaattatgtctctgattatatattgaaatatgccattaagtataa 597
Query: 245 atttctgatgtactaaatatattttgttataagtaagtatgtgccaagcaatattttagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atttctgatgtactaaatatattttgttataagtaagtatgtgccaagcaatattttagt 537
Query: 305 taggggacatacatagaacattctgatatttaaatttaactgataattctggttttgttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 taggggacatacatagaacattctgatatttaaatttaactgataattctggttttgttg 477
Query: 365 ttgtttcctgtgtgtagaaggagagagaaattaagtaagagaggacatagatcatggaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttgtttcctgtgtgtagaaggagagagaaattaagtaagagaggacatagatcatggaaa 417
Query: 425 tgttaaaacaacaacaacaacaagagcagcagcagcaaatcccttagatgaattagtaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgttaaaacaacaacaacaacaagagcagcagcagcaaatcccttagatgaattagtaca 357
Query: 485 gaagatttaactggtgcacagcctgtcatagttttaggtattaaaaaaaaaatcaattga 544
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 356 gaagatttaactggtgcacagcctgtcatagttttaggtatt-aaaaaaaaatcaattga 298
Query: 545 gaaggccatgttggagtgtagccaatggcaaatagagacaagaagggtcaaacccaagta 604
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 297 gaaggccatgttggggtgtagccaatggcaaatagagacaagaaggatcaaacccaagta 238
Query: 605 aaaacaacttaa-gcaataagaatgcactcattc 637
|||||||| ||| |||||||||||||||||||||
Sbjct: 237 aaaacaac-taaggcaataagaatgcactcattc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1034
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1024
Effective search space: 642048
Effective search space used: 642048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_e07.g1 MSMg01no135_e07.g1 CHROMAT_FILE:
MSMg01no135_e07.g1 PHD_FILE: MSMg01no135_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:21 2005
(558 letters)
>mm_chr1_97770844_97771802
Length = 959
Score = 1058 bits (547), Expect = 0.0
Identities = 556/559 (99%), Gaps = 1/559 (0%)
Strand = Plus / Plus
Query: 1 cagaacagccagggctatacagagaaaccctgtctctaaaaacaaacaaacaaaataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaacagccagggctatacagagaaaccctgtctctaaaaacaaacaaacaaaataaat 260
Query: 61 aaataaaaacaaaaaacaaaacaaaaaagatggtgtagattttatgatttccacaaattt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 aaataaaaacaaaaaacaaaacaaaaaagatggtatagattttatgatttccacaaattt 320
Query: 121 tatgtgttctcatatagttttcagtctgagtatttttttt-cttttcactattcaatttc 179
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 tatgtgttctcatatagttttcagtctgagtatttttttttcttttcactattcaatttc 380
Query: 180 agactttaaaaatctttgccaggcttaaggctttttctctcagctatttcatccattgca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactttaaaaatctttgccaggcttaaggctttttctctcagctatttcatccattgca 440
Query: 240 tatttcagctacatttttgcttcagtgcattctgcccactgctctcaggcttcctgttct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatttcagctacatttttgcttcagtgcattctgcccactgctctcaggcttcctgttct 500
Query: 300 atgacttagactgcttatcatagtagacacaactttactaaagtcttacataatagttac 359
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 atgacttagactgcttatcatagtagacacaactttactaaagtcttgcataatagttac 560
Query: 360 cgaaccacagtggtaccatttttatgagctttctctttctgcaaactgcttttatctcag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgaaccacagtggtaccatttttatgagctttctctttctgcaaactgcttttatctcag 620
Query: 420 ttgtttcgatgctttctcattgtatatttattcttattggtggtgacagggaggaataat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtttcgatgctttctcattgtatatttattcttattggtggtgacagggaggaataat 680
Query: 480 caaaaattttactctcctgatttaagaaacttagtaaaaggaatgcgttgataattataa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaaaattttactctcctgatttaagaaacttagtaaaaggaatgcgttgataattataa 740
Query: 540 ttacatgaggataagattt 558
|||||||||||||||||||
Sbjct: 741 ttacatgaggataagattt 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space: 520052
Effective search space used: 520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
