Query= MSMg01no135_i02.b1 MSMg01no135_i02.b1 CHROMAT_FILE:
MSMg01no135_i02.b1 PHD_FILE: MSMg01no135_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:39 2005
(176 letters)
>mm_chr1_65905801_65906376
Length = 576
Score = 321 bits (166), Expect = 1e-92
Identities = 172/174 (98%)
Strand = Plus / Minus
Query: 3 gaattcagcatattttaccatatatacatgtttcctattatcaaacttgtcatataagtt 62
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaattcagcatatttgaacatatatacatgtttcctattatcaaacttgtcatataagtt 317
Query: 63 taaacaattacaataagtcaagaaaataatttatatggagacatttcttcctggtgttag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 taaacaattacaataagtcaagaaaataatttatatggagacatttcttcctggtgttag 257
Query: 123 aaaacaagggaaagtctttttaaaaggctagaccttcttctgggtatcattggt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaaacaagggaaagtctttttaaaaggctagaccttcttctgggtatcattggt 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 576
Length adjustment: 8
Effective length of query: 168
Effective length of database: 568
Effective search space: 95424
Effective search space used: 95424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no135_i02.g1 MSMg01no135_i02.g1 CHROMAT_FILE:
MSMg01no135_i02.g1 PHD_FILE: MSMg01no135_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:39 2005
(436 letters)
>mm_chr1_65784678_65785512
Length = 835
Score = 835 bits (432), Expect = 0.0
Identities = 435/436 (99%), Gaps = 1/436 (0%)
Strand = Plus / Plus
Query: 1 tcttcaatactaactcattgtttactttcatttgttctcatacattctacatccaaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttcaatactaactcattgtttactttcatttgttctcatacattctacatccaaattg 260
Query: 61 ctctagagttttccatgttacagagacactgtaagtatcacagggaggtgatgtgtaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctagagttttccatgttacagagacactgtaagtatcacagggaggtgatgtgtaata 320
Query: 121 taggaacagttagatgaagaaagagttcagtgaagttttcaaagaccaaggaagaatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggaacagttagatgaagaaagagttcagtgaagttttcaaagaccaaggaagaatggg 380
Query: 181 tgaaaacagcaacactatgcccaaacacaggactgagtggacaagtcatgctttaagtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaaaacagcaacactatgcccaaacacaggactgagtggacaagtcatgctttaagtga 440
Query: 241 agtatggaggacatgggtagcagagctgtgaatatttctgtgtgtctataaaactaccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtatggaggacatgggtagcagagctgtgaatatttctgtgtgtctataaaactaccat 500
Query: 301 cttggtgcacaataactttatgatagtcatttccacactaattgtacatttcctgttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttggtgcacaataactttatgatagtcatttccacactaattgtacatttcctgttcaa 560
Query: 361 gttctttttttttttttgtaattaaacataaatccaaagacaaaatgggaatgggttttg 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttctttttttttttt-gtaattaaacataaatccaaagacaaaatgggaatgggttttg 619
Query: 421 aggaacatgacaagat 436
||||||||||||||||
Sbjct: 620 aggaacatgacaagat 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 835
Length adjustment: 9
Effective length of query: 427
Effective length of database: 826
Effective search space: 352702
Effective search space used: 352702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
