TGCGGCCGCTAAACGACTCCTATAGTCCGAAGCGGCGCGGAATTCCCATA
AACTGGCAGCACAAGTTTTCTAAACAAAGGTAATTTTCATTAGGTATTAT
CACATTTTTTATCTCTTTACCTTGAAAGGCATGTATTCTGGTGTTCAACT
GTGTTGTTGTGATGAGTGCAGAAAATCGCTGTTCTATGTTGAATAGCTAC
ACACACACACACACACACACACACACACACACACACACACAAAGAATTTC
AAAGAGTGGGTCATTATGTAGATCTAGTTTTAGTGTCTTTTAGGAAACTC
CTCTGATTTCTTGAATGATTCAGTGGCTTATATTCCTGCCAGCTGTGCTT
CTCGTCATATCCTCACCATTAGTGATTGACATTTCTTGTCTTGATGAGCA
TCATTCTGACTAGGATAAGATGAACGCTCAGAACAGTTCCCCTTTGCATT
TCAATGATGAGTAAGGATGCTGATCAAGTTTTAAAATGTTTATTTATTTT
TTTCACCTTTCGGTAACCATTTACTCTGTTCATTAACTTAATTAGTTATT
GGATGATTTGTTTTTAACATTTACTTTTTTAGATGTTTATATATTAATAT
CCTGTTTGATACAGAGTTGACAAAACCTTTTCTTTTTCCATTTTGTTAGC
TATCTCTTCTTTGCGATTCCTGTTTCCATTGTCGAGTAGGAGGCTTCTAA
TTTCCTGTAAA

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXATAAGTCCCATAGGAGCTACTGTTCGAACTACTGGG
AAAACCACCCCTAATCTATAAAACCTCTTTCCATACTACATCATCTCTTA
TGAATCCAATCAACTTTCAACATCAGCAATTTAGAGACCAAGTTTCAACA
TCGAAACTGTAGGAAGAACTAATCAAACTATACTCAAAATATAATACTGT
GTATTTACATATAAAGCATCAAAGACATAAATCTACAAATGTTTATGTCA
ATATTATTTAATATCAAGAATGTCAGGGACTATTTTAAAACAAGTGAAAT
GTTATAATGAATCTTTATTTCAGAGTAAAATTATAAAACTCTACTATGGT
GGTAAATTGCACGTTGGATTCACAAATACTTCAAAATATCATCTGATTAA
GGATGATGTCTTAACCATTTTAAAACATGTTCTTTATAATTTAAGCATTA
TCTTTATATGAACGTTCATGAGATTGTAACCTTACACCTACATATCCAAT
ATATAGGTACATTTAGTTGTTATTAACTTTAAGATGAATAAACCTTTCAA
TGATAAAATCCTCTAATTATTCTTCTAAAAGAAACATCTCCAAATTTGTA
TATGAATAAGAATATACAGTCTTATAGGAAGACTTTCATGTGAAAAGTGT
AGGTTCAGTATAATTGA

Query= MSMg01no135_l14.g1 MSMg01no135_l14.g1 CHROMAT_FILE:
MSMg01no135_l14.g1 PHD_FILE: MSMg01no135_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:55 2005
         (628 letters)



>mm_chr1_148873603_148874631
          Length = 1029

 Score = 1162 bits (601), Expect = 0.0
 Identities = 622/629 (98%), Gaps = 1/629 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataagtcccataggagctactgttcgaactactgggaaaaccacccctaatctataaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagtcccataggagctactgttcgaactactgggaaaaccacccctaatctataaaac 260

                                                                       
Query: 61  ctctttccatactacatcatctcttatgaatccaatcaactttcaacatcagcaatttag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctttccatactacatcatctcttatgaatccaatcaactttcaacatcagcaatttag 320

                                                                       
Query: 121 agaccaagtttcaacatcgaaactgtaggaagaactaatcaaactatactcaaaatataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaccaagtttcaacatcgaaactgtaggaagaactaatcaaactatactcaaaatataa 380

                                                                       
Query: 181 tactgtgtatttacatataaagcatcaaagacataaatctacaaatgtttatgtcaatat 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 tactgtgtatttacatataaagcatcaaagacgtaaatctacaaatgtttatgtcaatat 440

                                                                       
Query: 241 tatttaatatcaagaatgtcagggactattttaaaacaagtgaaatgttataatgaatct 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatttaatatcaggaatgtcagggactattttaaaacaagtgaaatgttataatgaatct 500

                                                                       
Query: 301 ttatttcagagtaaaattataaaactctactatggtggtaaattgcacgttggattcaca 360
           ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||
Sbjct: 501 ttatttcagagtaaaattataaagctctgctatggttgtaaattgcacgttggattcaca 560

                                                                       
Query: 361 aa-tacttcaaaatatcatctgattaaggatgatgtcttaaccattttaaaacatgttct 419
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatacttcaaaatatcatctgattaaggatgatgtcttaaccattttaaaacatgttct 620

                                                                       
Query: 420 ttataatttaagcattatctttatatgaacgttcatgagattgtaaccttacacctacat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttataatttaagcattatctttatatgaacgttcatgagattgtaaccttacacctacat 680

                                                                       
Query: 480 atccaatatataggtacatttagttgttattaactttaagatgaataaacctttcaatga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccaatatataggtacatttagttgttattaactttaagatgaataaacctttcaatga 740

                                                                       
Query: 540 taaaatcctctaattattcttctaaaagaaacatctccaaatttgtatatgaataagaat 599
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taatatcctctaattattcttctaaaagaaacatctccaaatttgtatatgaataagaat 800

                                        
Query: 600 atacagtcttataggaagactttcatgtg 628
           |||||||||||||||||||||||||||||
Sbjct: 801 atacagtcttataggaagactttcatgtg 829


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space:   629742
Effective search space used:   629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)