XXXXXXXXXXXXXXXXXXXXXXXXXXTCGAGAATCCGCGGAATTCCAGCA
TTGAATTGCCTTTTTACAAGTCATTAAATCTCTCCAAACCTCAACTTTTT
CTGTCGGTAAAATAGGTAACATATCTTTATAAGCAGTATGTTTCCATTCA
TGTTAATGAATAGAAGGGAACAAAATGATAATAAATGATTAAGGATTATT
GATGGTTAGTGTTGTCAACCTGCCAAGGACTGGAAACACTTTGGACACAG
GCCTTCAGATAAACTGAGAGGGAGTTTTTTAGATTTGGTTAGCCTATAGT
TATGTCTTGAGGGATTATCTTGATTATGTTAATTGAGGGTCAAGACCCAT
CCTTATAGAAGATGGTACCATTGTCTGAGCTTTGGTTTCTACACTACATA
GTGGATGCTCACACCCAGCTATTGGATGGAGCACAGGGCCCCCAATGGAG
GAGCTAGAGAAAGTATCCAAGGAGGTAAAGAGATCTGCAACCCTGTAGGT
GCAACATTATGAACTAACCAGTACCCTGGAGCTCTTGACTCTAGTTGCAT
ATGTATCAAAAGATGGCCTAGTCGACCATCACTGGAAAGAGAGGCCCATT
GGACACGCAAACTTTATATGCCCCAGTACAGGTGAATGCCAGGGCCTAAC
AATGGGAATGGTTGTGCTAGGAACTTCTCCTCTTTTCACTACATTATTTA
ACTCTTTATCCCTCCCACCCCTTCATCTTTCC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTGGGGAAGGCTCAGATATTTAAAAAGTGTAAGTT
AAGCTTATGTTTCAGTCCCTTCTATCTCTAAGGAAAATTGCTGTTCCTAA
TTTTTTTGAAGCTGCTTTATGCCACCCTGATTGGGTCCTCAATACAGAGA
AAGACATTAGTTTTCAGCTGAAAAAAAAGCCTAGAGCCATATGTGATTTT
AGGGACCAAATTTGGATGATAAAGCAAAAGAGGTCTAGGGAAGATTTAAA
TAATGAATAAAGAAAAGCTGGGCCTTTTCTTCACGCATATATAGGACTGA
CGGTTCTGGAGACATCTGCTTGGGTTCTGTGCATGGCTTTCTTGGTAGTT
ACTATGATACCTGCATTTGCACGCTCAGGCTAGCCAGGAGGAGGGCCAAT
GATGCTTAGCTTTTATGTGTGTCCCTTCAAAGTCTGAGCTCAGCAACCAC
ATTGGTTTCTTAGAGCTGTCTGACCCTTTTCTTCCTCTGTGGCTTCATTA
TTTTCAGTTGTACTATTAGAACTGCATTTATGTGAACTTCTGAAATCATC
TTCCATCTCTCTATTTCCTGGCATAAAACCCAATTTTATTTTTTATTTTT
AAATAAAAATAAATCTTGTTCACTATTCCTCAGCCTCGTCCGTGGCATAT
ATTTCTAGCGGGTCCTTTATTTCCATGAC

Query= MSMg01no135_p22.g1 MSMg01no135_p22.g1 CHROMAT_FILE:
MSMg01no135_p22.g1 PHD_FILE: MSMg01no135_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:14 2005
         (590 letters)



>mm_chr1_69413120_69414110
          Length = 991

 Score = 1135 bits (587), Expect = 0.0
 Identities = 590/591 (99%), Gaps = 1/591 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctggggaaggctcagatatttaaaaagtgtaagttaagcttatgtttcagtcccttctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ctggggaaggctcagatatttaaaaagtgtaagttaagcttatgtttcagtcccttctat 536

                                                                       
Query: 61  ctctaaggaaaattgctgttcctaatttttttgaagctgctttatgccaccctgattggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ctctaaggaaaattgctgttcctaatttttttgaagctgctttatgccaccctgattggg 476

                                                                       
Query: 121 tcctcaatacagagaaagacattagttttcagctg-aaaaaaaagcctagagccatatgt 179
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 475 tcctcaatacagagaaagacattagttttcagctgaaaaaaaaagcctagagccatatgt 416

                                                                       
Query: 180 gattttagggaccaaatttggatgataaagcaaaagaggtctagggaagatttaaataat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gattttagggaccaaatttggatgataaagcaaaagaggtctagggaagatttaaataat 356

                                                                       
Query: 240 gaataaagaaaagctgggccttttcttcacgcatatataggactgacggttctggagaca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaataaagaaaagctgggccttttcttcacgcatatataggactgacggttctggagaca 296

                                                                       
Query: 300 tctgcttgggttctgtgcatggctttcttggtagttactatgatacctgcatttgcacgc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tctgcttgggttctgtgcatggctttcttggtagttactatgatacctgcatttgcacgc 236

                                                                       
Query: 360 tcaggctagccaggaggagggccaatgatgcttagcttttatgtgtgtcccttcaaagtc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tcaggctagccaggaggagggccaatgatgcttagcttttatgtgtgtcccttcaaagtc 176

                                                                       
Query: 420 tgagctcagcaaccacattggtttcttagagctgtctgacccttttcttcctctgtggct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tgagctcagcaaccacattggtttcttagagctgtctgacccttttcttcctctgtggct 116

                                                                       
Query: 480 tcattattttcagttgtactattagaactgcatttatgtgaacttctgaaatcatcttcc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tcattattttcagttgtactattagaactgcatttatgtgaacttctgaaatcatcttcc 56

                                                              
Query: 540 atctctctatttcctggcataaaacccaattttattttttatttttaaata 590
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  atctctctatttcctggcataaaacccaattttattttttatttttaaata 5


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 991
Length adjustment: 10
Effective length of query: 580
Effective length of database: 981
Effective search space:   568980
Effective search space used:   568980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)