Query= MSMg01no136_c11.b1 MSMg01no136_c11.b1 CHROMAT_FILE:
MSMg01no136_c11.b1 PHD_FILE: MSMg01no136_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:26 2005
(440 letters)
>mm_chr1_78004460_78005298
Length = 839
Score = 787 bits (407), Expect = 0.0
Identities = 430/441 (97%), Gaps = 7/441 (1%)
Strand = Plus / Plus
Query: 4 ggaattccttgatagtccccataaggtgacgtaacctaccctccgatctcccacttggat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggaattccttgatagtccccataaggtgacgtaacctaccctccgatctcccacttggat 257
Query: 64 atttaaacttaatgtctcagacaggagggtcacagaagacagaggtgttgatacatttcg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atttaaacttaatgtctcagacaggagggtcacagaagacagaggtgttgatacatttct 317
Query: 124 catgctctctcctgatccttcgtctctctctctctctctctctctctctctctctc---- 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 catgctctctcctgatccttcgtctctctctctctctctctctctctctctctctctctc 377
Query: 180 --cctctcctcttgaccacttatattcactttctccttcactgtagccagagaccaagaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tccctctcctcttgaccacttatattcactttctccttcactgtagccagagaccaagaa 437
Query: 238 gcagactccagtttccctagaacagatcaatcctaacaacaatttactctcatggatgaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcagactccagtttccctagaacagatcaatcctaacaacaatttactctcatggatgaa 497
Query: 298 aatcccattttcctctatgagggactgctcagtcagaaggccatgtgggcccaatttgaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aatcccattttcctctatgagggactgctcagtcagaaggccatgtgggcccaatttgaa 557
Query: 358 agaaatgggaaaaacaccccagccacatccactgagagcctgaggagcaggctgtccaag 417
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agaaatgggaaaaagaaaccagccacatccactgagagcctgaggagcaggctgtccaag 617
Query: 418 aacaggggnggtgggggtggg 438
|||||||| ||||||||||||
Sbjct: 618 aacagggg-ggtgggggtggg 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 839
Length adjustment: 9
Effective length of query: 431
Effective length of database: 830
Effective search space: 357730
Effective search space used: 357730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_c11.g1 MSMg01no136_c11.g1 CHROMAT_FILE:
MSMg01no136_c11.g1 PHD_FILE: MSMg01no136_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:27 2005
(147 letters)
>mm_chr1_78155384_78155930
Length = 547
Score = 265 bits (137), Expect = 8e-76
Identities = 141/143 (98%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 1 tggcctgaaattgctttacatatcctgttctacattagaaaggatttgatgtgatgctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tggcctgaaattgctttacatatcctgttctacattagaaaggatttgatgtgatgctaa 256
Query: 61 atatatctgactaaaacctaatctcttctcaattatttatacaaaggttagatgatgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atatatctgactaaaacctaatctcttctcaattatttatacaaaggttagatgatgtgt 196
Query: 121 gtgtgtgtgtgtatgtgtgtgtg 143
|||||||||| |||||||||||
Sbjct: 195 gtgtgtgtgt--atgtgtgtgtg 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 147
Length of database: 547
Length adjustment: 8
Effective length of query: 139
Effective length of database: 539
Effective search space: 74921
Effective search space used: 74921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
