Query= MSMg01no137_c08.b1 MSMg01no137_c08.b1 CHROMAT_FILE:
MSMg01no137_c08.b1 PHD_FILE: MSMg01no137_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:44 2005
(272 letters)
>mm_chr1_43939759_43940430
Length = 672
Score = 511 bits (264), Expect = e-149
Identities = 270/272 (99%), Gaps = 2/272 (0%)
Strand = Plus / Minus
Query: 1 attccagcagactat-ccttatatattatgtatcatctttggaacaactggtctctattt 59
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 attccagcagactatgcc-tatatattatgtatcatctttggaacaactggtctctattt 413
Query: 60 tttgatgaaaaaattcaacagggtactaatttcttattatttaggattgtgttacccacg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tttgatgaaaaaattcaacagggtactaatttcttattatttaggattgtgttacccacg 353
Query: 120 gtggaaattgaaattatggaatttaaatctgtctttttctgagattcatggtctggcact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gtggaaattgaaattatggaatttaaatctgtctttttctgagattcatggtctggcact 293
Query: 180 aataagtaaacaaagagtacaaatcggccctctaattccaatagtctgactgatgtttca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aataagtaaacaaagagtacaaatcggccctctaattccaatagtctgactgatgtttca 233
Query: 240 agcttacaaaattgtggggtaaaaatggagtc 271
||||||||||||||||||||||||||||||||
Sbjct: 232 agcttacaaaattgtggggtaaaaatggagtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no137_c08.g1 MSMg01no137_c08.g1 CHROMAT_FILE:
MSMg01no137_c08.g1 PHD_FILE: MSMg01no137_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:44 2005
(186 letters)
>mm_chr1_43804958_43805543
Length = 586
Score = 306 bits (158), Expect = 7e-88
Identities = 161/162 (99%)
Strand = Plus / Plus
Query: 1 cagatattagtgtgcaataagctaagggaattctgggtcttcagacttttcgatactcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatattagtgtgcaataagctaagggaattctgggtcttcagacttttcgatactcct 260
Query: 61 aaatatacgtaaagctctgagctatttctgtccacatttttctttggtccaaatttagca 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattatacgtaaagctctgagctatttctgtccacatttttctttggtccaaatttagca 320
Query: 121 ttactaatttccaagcaagcttctgctttttttttttttttt 162
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttactaatttccaagcaagcttctgctttttttttttttttt 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 586
Length adjustment: 8
Effective length of query: 178
Effective length of database: 578
Effective search space: 102884
Effective search space used: 102884
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
