Query= MSMg01no138_c05.b1 MSMg01no138_c05.b1 CHROMAT_FILE:
MSMg01no138_c05.b1 PHD_FILE: MSMg01no138_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:04 2005
(664 letters)
>mm_chr1_70221005_70222063
Length = 1059
Score = 1208 bits (625), Expect = 0.0
Identities = 649/659 (98%), Gaps = 5/659 (0%)
Strand = Plus / Minus
Query: 5 ggaattcttaaaaactcacttctgtatataaaaccaaaatttttggtacttagggaacag 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ggaattcttaaaaacttacttctgtatataaaaccaaaatttttggtacttagggaacag 799
Query: 65 ataatctaagcacaaaataatatatatgtacaaactaatttcctcaaccaataaatactc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ataatctaagcacaaaataatatatatgtacaaactaatttcctcaaccaataaatactc 739
Query: 125 tgtaaataaatattattaggtaaaagaattaatcatataaaagtaaataaatctacattt 184
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 738 tgtaaataaa---tattaggtaaa--aattaatcatataaaagtaaataaatctacattt 684
Query: 185 tcaaattagtcgttatgaaactgacttctttgagtgtaagtaaatggggccagatgaacc 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 683 tcaaattagtcgttatgaaactgacttcttagagtgtaagtaaatggggccagatgaacc 624
Query: 245 aagtcagattttcccaagaagcccacaagccatcaaaactcctgaaccagaatttcttaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aagtcagattttcccaagaagcccacaagccatcaaaactcctgaaccagaatttcttaa 564
Query: 305 taatcatttgaaattattataaactgttatgaagactaattatttcaacagagatcagat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 taatcatttgaaattattataaactgttatgaagactaattatttcaacagagatcagat 504
Query: 365 gaccaaatgtcccatctagaacaagaacagagcttctcactatgagaacaaatagactac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaccaaatgtcccatctagaacaagaacagagcttctcactatgagaacaaatagactac 444
Query: 425 ctctgcagcaggaacaatcacactgcttaaatgagcagaggctcaagctctatgagtcct 484
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 443 ctctgcagcaggaacaatcacactgctaaaatgagcagaggctcaagctctatgagtcct 384
Query: 485 gccactcagagacttgtggtgtcagaagcgagttgggttccagagaataaaataggcaac 544
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 383 gccactcagagacttgtggtgtcagaagctagttgggttccagagaataaaataggcaac 324
Query: 545 tatgtctggcccaaaggcatatacatatatgtcaaatgatggtaattgtaactttttaag 604
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 323 tatgtctggcccaaaggcatatacatatatgtcaaatgatggtaattttaactttttaag 264
Query: 605 aatattagtttaaccactaactaaatgctacatcttcaaataatttgtgttttaaagaa 663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatattagtttaaccactaactaaatgctacatcttcaaataatttgtgttttaaagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1059
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1049
Effective search space: 686046
Effective search space used: 686046
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_c05.g1 MSMg01no138_c05.g1 CHROMAT_FILE:
MSMg01no138_c05.g1 PHD_FILE: MSMg01no138_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:05 2005
(625 letters)
>mm_chr1_70061364_70062389
Length = 1026
Score = 1180 bits (610), Expect = 0.0
Identities = 622/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 1 ctttaca-ttgtatgttgaagcatacccttactttacggtctgctctcagatttgccccc 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttacaattgtatgttgaagcatacccttactttacggtctgctctcagatttgccccc 260
Query: 60 aacctgaataactacttctgctttaggaagaacattaaggcacatattcaccacagcttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacctgaataactacttctgctttaggaagaacattaaggcacatattcaccacagcttt 320
Query: 120 cgtaccactgacatttcagtattcattatcacttacagcagtgaatgttttgtgtaaaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtaccactgacatttcagtattcattatcacttacagcagtgaatgttttgtgtaaaca 380
Query: 180 gaagcagatctttctacttgacaaatctgacctttacgcttaccttcattgtgcagatta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagcagatctttctacttgacaaatctgacctttacgcttaccttcattgtgcagatta 440
Query: 240 tatataatggagaattaaagattattgccacagaaatgaataaaggatatcaatttcaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatataatggagaattaaagattattgccacagaaatgaataaaggatatcaatttcaaa 500
Query: 300 cgcagaatgtcagatctaatagctgcagtggaaggagatttatgagcgagaaacacattt 359
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgcagaatgtcagaactaatagctgcagtggaaggagatttatgagcgagaaacacattt 560
Query: 360 tctttacatagttccagtgtttttaaaacatgtatttcatcttatttttaaattatttag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctttacatagttccagtgtttttaaaacatgtatttcatcttatttttaaattatttag 620
Query: 420 agctgttgaattaatttctaaaatgttgttgggcctctgtatctgtgggttctacactgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 agctgttgaattaatttctaaaatgttgttgggcctctgtatctgtgggttctgcactgg 680
Query: 480 aagattgaactaaccacgaatatgttgtaagcctttgttggtcgcatctgaacactaaga 539
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 aagattgaactaaccacgaatatgttgtaagcctttgttggtcgtatctgaacactaaga 740
Query: 540 taatattagtctgtgatggttatatttgtaccacacaaatgctattgggatatgctggtt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taatattagtctgtgatggttatatttgtaccacacaaatgctattgggatatgctggtt 800
Query: 600 ccatttgtactgcaaagataccatta 625
||||||||||||||||||||||||||
Sbjct: 801 ccatttgtactgcaaagataccatta 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space: 624840
Effective search space used: 624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
