Query= MSMg01no138_o03.b1 MSMg01no138_o03.b1 CHROMAT_FILE:
MSMg01no138_o03.b1 PHD_FILE: MSMg01no138_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:04 2005
(599 letters)
>mm_chr1_68880950_68881949
Length = 1000
Score = 1151 bits (595), Expect = 0.0
Identities = 598/599 (99%), Gaps = 1/599 (0%)
Strand = Plus / Minus
Query: 1 atcattttaggattagttgtaggggcaagggcaaataaacactacaggtagataacacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 atcattttaggattagttgtaggggcaagggcaaataaacactacaggtagataacacgc 740
Query: 61 acgtatgagcagctctgggtgtttaaattttaccctatgctttaaccaaatctaatgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 acgtatgagcagctctgggtgtttaaattttaccctatgctttaaccaaatctaatgcat 680
Query: 121 atgaataggcagtaaatatataagagccactcatggaataggacactccctttttccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atgaataggcagtaaatatataagagccactcatggaataggacactccctttttccagg 620
Query: 181 ataaactttggcatgcattattgcccatgtaattgccatttcctgatgaaaacagcggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ataaactttggcatgcattattgcccatgtaattgccatttcctgatgaaaacagcggtt 560
Query: 241 tcttcgaaggcatttaacaggagccaaatttttaatgcctcttttggcattcaccttcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tcttcgaaggcatttaacaggagccaaatttttaatgcctcttttggcattcaccttcat 500
Query: 301 agtctctaggcactctgccatttcagtctgaaataatgaaggatagagaggaaagatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agtctctaggcactctgccatttcagtctgaaataatgaaggatagagaggaaagatctt 440
Query: 361 tgtaaagttccaggtctctctaggttgaagccatcaggagtccaaacaaatgacttcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgtaaagttccaggtctctctaggttgaagccatcaggagtccaaacaaatgacttcaag 380
Query: 421 gttgccaaagatgaaaatgaaaaggtttatagcttgtttccccgtctaagacataaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gttgccaaagatgaaaatgaaaaggtttatagcttgtttccccgtctaagacataaaatt 320
Query: 481 gcatctatttatgatgtctacct-ccccccaccctgatctatagcgtgaaatcactccct 539
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcatctatttatgatgtctacctcccccccaccctgatctatagcgtgaaatcactccct 260
Query: 540 caaaacctgtctaataaagacttagctcttcctgaaatcctctgaatggagccgaagaa 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 caaaacctgtctaataaagacttagctcttcctgaaatcctctgaatggagccgaagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_o03.g1 MSMg01no138_o03.g1 CHROMAT_FILE:
MSMg01no138_o03.g1 PHD_FILE: MSMg01no138_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:04 2005
(607 letters)
>mm_chr1_68787131_68788137
Length = 1007
Score = 1174 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Plus
Query: 1 tttaatttatcctttaagaaaataaatttgtaataattgcattttctgtgcttgtacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaatttatcctttaagaaaataaatttgtaataattgcattttctgtgcttgtacaaa 260
Query: 61 agcacacaagaggatgatttaatctaatacacacacacacacatacacacacacacacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcacacaagaggatgatttaatctaatacacacacacacacatacacacacacacacac 320
Query: 121 acacacacatatatatataaaatttggaatatatagtttatcctattttttgataattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacacacatatatatataaaatttggaatatatagtttatcctattttttgataattat 380
Query: 181 ctccatgtaactaagactgaaagattagagcaacaacatttaaaagttatttcaatacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccatgtaactaagactgaaagattagagcaacaacatttaaaagttatttcaatacca 440
Query: 241 tacagtaagctgttctagcacatcatgttagcgatacatatatgcacataaaacccaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacagtaagctgttctagcacatcatgttagcgatacatatatgcacataaaacccaacc 500
Query: 301 tcaaaaataccatttttaaaatgtgttaagtaagcatcttgatataaatattttttaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaaaaataccatttttaaaatgtgttaagtaagcatcttgatataaatattttttaaag 560
Query: 361 tatgccagaaataagtttgtaacaaattgctgatattaactgagttatccacacgcatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgccagaaataagtttgtaacaaattgctgatattaactgagttatccacacgcatct 620
Query: 421 tcatgtatgttcaaagaaagtggtctgctggtgcacataataatattccacatttgatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatgtatgttcaaagaaagtggtctgctggtgcacataataatattccacatttgatca 680
Query: 481 gtgggttatgtttttgttcatatgtaagcccatgaagatacacatagagatgcctctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgggttatgtttttgttcatatgtaagcccatgaagatacacatagagatgcctctgtt 740
Query: 541 gcgtgtatactggtacctattttttcttgcacactcattttaaatattatttttcagaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcgtgtatactggtacctattttttcttgcacactcattttaaatattatttttcagaat 800
Query: 601 acaaaaa 607
|||||||
Sbjct: 801 acaaaaa 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
