Query= MSMg01no140_e16.b1 MSMg01no140_e16.b1 CHROMAT_FILE:
MSMg01no140_e16.b1 PHD_FILE: MSMg01no140_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:58 2005
(390 letters)
>mm_chr1_82350494_82351283
Length = 790
Score = 708 bits (366), Expect = 0.0
Identities = 381/386 (98%)
Strand = Plus / Plus
Query: 5 gaattcaagaggataccattttaatgctgtagtcacttatagtacacaggtcaaataaat 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagaggagagcattttaatgctgtagtcacttatagtacacaggtcaaataaat 264
Query: 65 aacaaatcatattcccaaaagtatatgtcactgctataatttatagtgattccttgattc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacaaatcatattcccaaaagtatatgtcactgctataatttatagtgattccttgattc 324
Query: 125 taagacactcatctttttagtttataacaggcaacgaatacaatgagaacaacatcaggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taagacactcatctttttagtttataacaggcaacgaatacaatgagaacaacatcaggt 384
Query: 185 atcctcagactagtaagaatactgcttaattagggattatattgttgttgctgctgctgc 244
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 atcctcagactagtaagaatactgcttaattagggattgtattgttgttgctgctgctgc 444
Query: 245 tgttgttttgctatttgtaaaagccagagcttcttctcgtggacttgagatatttggaaa 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 tgttgttttgctatttgtaaaagccagagcttcatctcgtggacttgagatatttggaaa 504
Query: 305 atctggtaaaaacaatctgaaaatgttgactatgtgaaggaagtcatccttctcgctttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atctggtaaaaacaatctgaaaatgttgactatgtgaaggaagtcatccttctcgctttg 564
Query: 365 gggatggaggcctcgccttgaggttg 390
|||||||||| |||||||||||||||
Sbjct: 565 gggatggaggtctcgccttgaggttg 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_e16.g1 MSMg01no140_e16.g1 CHROMAT_FILE:
MSMg01no140_e16.g1 PHD_FILE: MSMg01no140_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:59 2005
(294 letters)
>mm_chr1_82503844_82504539
Length = 696
Score = 455 bits (235), Expect = e-132
Identities = 278/293 (94%), Gaps = 2/293 (0%)
Strand = Plus / Minus
Query: 2 cactgataatgagccattcaatcaataatctcttcatgcattgggtttctttgattattc 61
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cactgataatgtgccatccaatcaataatctcttcatgcattgggtttctttgattattc 435
Query: 62 agggtcatgctgtaattaatttatccatatatttaatgcaatttatttaatgttgtttcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agggtcatgctgtaattaatttatccatatatttaatgcaatttatttaatgttgtttcc 375
Query: 122 tcagtaattgat--aaaaaaaaaaaaggatccttaattattcaccataactgtatgttag 179
|||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 374 tcagtaattgataaaaaaaaaaaaaaggatcctcaattattcaccagaactgtatgttag 315
Query: 180 ctttggcagtttaaagcataatatatgtgattctgtttatttagaaagtgtgtgcctccc 239
|||||| | ||||||||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct: 314 ctttggttgcttaaagcataatatatgtgattctgttcacttagaaagtgtgtgcctacc 255
Query: 240 ccacatagattatgtgacagatgtatccaccccatgtccaaagcttcatttca 292
||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 254 ccacatagaccatgtgacagatgtatccaccccatgcccaaagcttcatttca 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 696
Length adjustment: 9
Effective length of query: 285
Effective length of database: 687
Effective search space: 195795
Effective search space used: 195795
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
