XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGNAAATCCGCGNAATTCT
TATAATCTCTCCCCCTCAAGACCCTGATGNCCAAACCATGTATTATTTTG
GCATGCTCAACATTTATCAAATGNCAGTTTCATCACGCAGACTTTGCTAC
ATTCTTGNCCCTAAACATTTAGGGTCAGCCTCCATCTCTAAATCCTACGC
CCGGGGGAGGGAGCGGGGAAACTCCTCCTCCAAAAAATGGGCCCAACCAA
CCTGATTTCAAATTAAATTTTTCTTTGAATCTTTTTTTTCTTTTTATAGA
AATAAATATATTAAATATTATATAAGAAGAAAAAAAANCTNCCCCNNCNC
CCCCCGNCCCCNNNCCCCCCCCCCCCTCGGCTTTTATTTACTATTATCTG
CGAGGAGGGAAGAGGGGAGGAAAAGAAGAAAAAAAAAAAAAGAAAAAGAA
AAAGAAAAAAAGAAAAAAAGAAAGAAAAAAAAACCCTNNNNTNTNTTNTT
TNTNNTTCCCCTTTTTTTTCCCCTTTAAAAATGGGCGGGGGACGAGAAGC
AAATTATTAAAAAAAANNNNNNAAAAAATAAAAAACCACCANCCTTTTTT
CTTTCTTTCTCTCCTTTTTTATAATTACCACCCCCTTTTTCTTTCTTCTC
TTCTCTCTCTTCCCCCCCCCCTCCANTCTTTCCTTCCCTCCTTTCTTCAT
AAAAAATACTACCCNCCCTTCTCCCCTTTCCTCCTTTCTTTTTATTCTCC
CAATCCTCCCCTTCTCCCCTTTTTTTTCTTTCTTTTTTCTTTTTT

AATGCAGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGCACCCACCCATTATTGAAGCTCAAGTA
AGACATGCCCCAGAGTGCCCTGATATGCAAAGAAACAAGAGCCACTCTGG
GGTTTCCAAAGACCTCCCGCGGGAAGACTATTGTCTGTTCCTGAAAGACA
GACGTGGCATTAGAGGGTATGAATGAAGAATGTCCACATCAGACTTGTGT
TCAGGAAGGACTGATCTGGATGTTAGATAAGGTTTAAGTCACCACCTCCA
GCAAGTGCTGGGAACTGTCTCGTACTGTCCTCCTCTGCGTCCCATCCCTG
GCTAGTCGTCTCCCTATAAGGCTCTTTGTTACCAATTAAGCTTTAGCTTG
TCTTGAAGTTCATCCTTAGGTCACCAGAGCTGGGACCTGGCTGTTCAAAC
TCCTCTTCTAGCTCTTGACAGCACCCGATGCCTGTTGTGACACAGTGGCA
TCTTGTATATTGCATGAAATGAGATGGGGGGTCAGAGAAGGGAAATAAGA
CTGTTGTGGCCCTGGTCTTGACTGCTGAGGATGATAAAACCTGCCTTCTG
AGAGTAGGTTATGGCCTCTTTTGGAATACCTTTCCCACCGATATTAGCGT
AGCTTTCCTGCCTAATTGTGCACCCCTATTCTTTTTTTTTTACACTTTTT
TTAACCCCTTTAT

Query= MSMg01no140_f17.g1 MSMg01no140_f17.g1 CHROMAT_FILE:
MSMg01no140_f17.g1 PHD_FILE: MSMg01no140_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:04 2005
         (429 letters)



>mm_chr1_91975380_91976208
          Length = 829

 Score =  793 bits (410), Expect = 0.0
 Identities = 422/426 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   acccacccattattgaagctcaagtaagacatgccccagagtgccctgatatgcaaagaa 63
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 acccacccattattgaagctcaagtaagatatgccccagagtgccctgatatgcaaagaa 263

                                                                       
Query: 64  acaagagccactctggggtttccaaagacctcccgcgggaagactattgtctgttcctga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acaagagccactctggggtttccaaagacctcccgcgggaagactattgtctgttcctga 323

                                                                       
Query: 124 aagacagacgtggcattagagggtatgaatgaagaatgtccacatcagacttgtgttcag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagacagacgtggcattagagggtatgaatgaagaatgtccacatcagacttgtgttcag 383

                                                                       
Query: 184 gaaggactgatctggatgttagataaggtttaagtcaccacctccagcaagtgctgggaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaggactgatctggatgttagataaggtttaagtcaccacctccagcaagtgctgggaa 443

                                                                       
Query: 244 ctgtctcgtactgtcctcctctgcgtcccatccctggctagtcgtctccctataaggctc 303
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgtcacgtactgtcctcctctgcgtcccatccctggctagtcgtctccctataaggctc 503

                                                                       
Query: 304 tttgttaccaattaagctttagcttgtcttgaagttcatccttaggtcaccagagctggg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttgttaccaattaagctttagcttgtcttgaagttcatccttaggtcaccagagctggg 563

                                                                       
Query: 364 acctggctgttcaaactcctcttctagctcttgacagcacccgatgcctgttgtgacaca 423
           |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 564 acctggctgtacaaactcctcttctagctcttgatagcacccgatgcctgttgtgacaca 623

                 
Query: 424 gtggca 429
           ||||||
Sbjct: 624 gtggca 629


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space:   344400
Effective search space used:   344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)