CATAATTTGCGGCGCTATACGACTCCTATATGCAGAGAATCCGCGGAATT
CTTCTGTTGTGCCTGTTTATAATGAGTGCTATTTGCTGTCATTTCAGATA
CTTTATACCACCTCTTATGTGATAATAAACATTCTCTGTGATGTATAGGT
TTTCTAAATTGATTTTCTGAGTTGGCATACAGAGTAATGGATTCTGTGAT
GGCGCTTTCTGTCCTGTCCCTATGTGTCTCCTTTCCCACGTCCCTCCTCA
TCCCCACGCCCTCCTGCTGGCCTCATCCTCCCTCCTAAAGCTCCCTTCCT
CTCTTTATTTCACAAATATTCTAATATTCTTTAGCTTCAGGTACTTCATA
AATTAGTAGAAATATATGTAATGGTACAGCCATCAAGGGCCTCACAGGTC
ACCTTCAAGGCTTGAAGTCTGGCATCAATAGAAGCTATCTTTAGTGTTCT
TCATCACTGCCTGGCTTAGCCTGTGAGTGGGGCTTCTTGGCCCTCTTCCC
TCACTGAACAACGCTCATTTCACTTACCACACTCACCTTCTGGGATTGCG
CTCTGCGCTGTATGTGTGCTCTGAGTTCCATCCAACTCGGAACCAATTGG
TCTTTAGTCATACCCTTTCCCTTTTCCACAACTGAGCCACATATTTTCCA
TTGGCCATTGACCGTTGTTCGCCCGTTTTTGTTTGTGAGCTAAACCCAAG
TGTTTGACGCTN

CATGCTCGTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGGTTAGTCTTGGTCTTATGGAACCCT
GCCTTAGGAAGGAAGGAAGTAAGGAAGGAAGGAAGGAAGGAAGTAAGGCA
GGAAGCTACTCATCCTTCTCCTCTTCTTTTCTCCTTTTCTCTCCCCCTTT
CCCCTCCTCCTCCTCCTCCTCTTTTTTCTCCCCCTTTTTTCTCCCCCTTT
CCTCCCCCTCCTCCCTCCTCTCTCCTCCTCTTTCTCTCTTCCCTCCCTTC
TTCTCTCTCTTCTCCCCCTCCTCTTCTTTTTCTCCTCCCTCCCCCTCCTC
TTTTTTTCCTTTTTTTCCCTCCTTCCTCCTTCTTCTCCTCCTCACTCCTC
TCCTCTTCTCCTCTCTCTTCTCCTCTCTTCTCCTCTTCTCCCTTCTCTCT
CTTTCTCTCTCCTCTTCTTTCTTCTCTCTCTCTCCTCCTCCTCTTACTCT
TCTCCTCCTTCTTCTCCTCTTCTCTCTCTCTCTCCTCTTCTCCCTCCCCT
CCTCTCTCCTCTCTCCCTCTTCTCTTTCCCCTTCTCTCCTCTTTCTCCTT
CCTCTCTCTTCTCCTTCTCTTCTTCCCTCCCTCTTTCTCCCTCTTCTCTT
TCTTTCTTTCCCTTCCTCCTCTCCTTCTCCCTTCTCTCTCTCCTCCTTTC
TTTTCATCTTCCTTCTTCTTCCCTCTCTCGCCTTC

Query= MSMg01no140_g18.b1 MSMg01no140_g18.b1 CHROMAT_FILE:
MSMg01no140_g18.b1 PHD_FILE: MSMg01no140_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:09 2005
         (482 letters)



>mm_chr1_192408915_192409797
          Length = 883

 Score =  837 bits (433), Expect = 0.0
 Identities = 470/489 (96%), Gaps = 12/489 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcttctgttgtgcctgtttataatg-agtgctatttgctgtcatttcagatacttt 64
           ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 584 gaattcttctgttgtgtttgtttataatgtagtgctatttgctgtcatttcagatacttt 525

                                                                       
Query: 65  ataccacctcttatgtgataataaacattctctgtgatgtataggttttctaaattgatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ataccacctcttatgtgataataaacattctctgtgatgtataggttttctaaattgatt 465

                                                                       
Query: 125 ttctgagttggcatacagagtaatggattctgtgatggcgctttctgtcctgtccctatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttctgagttggcatacagagtaatggattctgtgatggcgctttctgtcctgtccctatg 405

                                                                       
Query: 185 tgtctcctttcccacgtccctcctcatccccacgccctcctgctggcctcatcctccctc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tgtctcctttcccacgtccctcctcatccccacgccctcctgctggcctcatcctccctc 345

                                                                       
Query: 245 ctaaagctcccttcctctctttatttcacaaatattctaatattctttagcttcaggtac 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 344 ctaaagctcccttcctctctttatttcacaaatatcctaatattctttagcttcaggtac 285

                                                                       
Query: 305 ttcataaattagtagaaatatatgtaatggtacagccatcaagggcctcacaggtcacct 364
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 284 ttcataaattagtagaaatatatgtaatggtacagccaccaagggccccacaggtcacct 225

                                                                       
Query: 365 tcaaggcttgaagtctggc-----------atcaatagaagctatctttagtgttcttca 413
           |||||| ||||||||||||           ||||||||||||||||||||||||||||||
Sbjct: 224 tcaaggtttgaagtctggcccccgggtggcatcaatagaagctatctttagtgttcttca 165

                                                                       
Query: 414 tcactgcctggcttagcctgtgagtggggcttcttggccctcttccctcactgaacaacg 473
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 164 tcactgcctggcttagcctgtgagtggggcttcttgcccctcttccctcactgaacaacg 105

                    
Query: 474 ctcatttca 482
           |||||||||
Sbjct: 104 ctcatttca 96


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space:   412056
Effective search space used:   412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)