Query= MSMg01no140_h17.b1 MSMg01no140_h17.b1 CHROMAT_FILE:
MSMg01no140_h17.b1 PHD_FILE: MSMg01no140_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:13 2005
(253 letters)
>mm_chr1_189286896_189287549
Length = 654
Score = 460 bits (238), Expect = e-134
Identities = 250/254 (98%), Gaps = 1/254 (0%)
Strand = Plus / Plus
Query: 1 ggaacattcttgtgtgtgtgtcaggtaaccttggccacacacctcggtcctccaaagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaacattcttgtgtgtgtgtcaggtaaccttggccacacacctcggtcctccaaagatc 260
Query: 61 cacatcatgtcacaactaagtgttggcagtaatttcttgcacctcacaggaccagaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacatcatgtcacaactaagtgttggcagtaatttcttgcacctcacaggaccagaatca 320
Query: 121 aacctatgtaagtttgataaaatatcagagacaccataactcatgtcctgttgctccaag 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacctatgtaagtttgataaaacatcagagacaccataactcatgtcctgttgctccaag 380
Query: 181 gaaggaacttactatttctgcttcgcaaaagatgatgtctttggtttctgcagacatttt 240
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 381 gaaggaacttactatttctgctttgcaaaagatgttgtctttggtttctgcagacatttt 440
Query: 241 tttcccc-tgagac 253
||||||| ||||||
Sbjct: 441 tttccccctgagac 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 654
Length adjustment: 9
Effective length of query: 244
Effective length of database: 645
Effective search space: 157380
Effective search space used: 157380
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no140_h17.g1 MSMg01no140_h17.g1 CHROMAT_FILE:
MSMg01no140_h17.g1 PHD_FILE: MSMg01no140_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:13 2005
(249 letters)
>mm_chr1_189454248_189454896
Length = 649
Score = 420 bits (217), Expect = e-122
Identities = 241/249 (96%)
Strand = Plus / Minus
Query: 1 aattccatagccgagattctggccggtaaacagcagcggtctcgggaaagcccaaatatt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 449 aattccatagccgagattctggccggtaaacagcagcggtcacgggaaagcccaaatatt 390
Query: 61 cttaacagtcgtgctggaagaagagacgttgatcttgacccgagggatggaggttcagat 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 389 cttaacagtcgtgctggaagaagagacgttgatcttgaccagagggatggaggttcagat 330
Query: 121 tccatccttctaccggaagacatgggctgagatcacccttccaatggggacctgagtttc 180
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 329 tccatccttctaccggaagacatgggttgagatcacccttccaatggggacctgagcttc 270
Query: 181 ctttctcatagtgccagacttgagagtagagacacgtatcagagaacatgagaactgtcc 240
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 269 ctttctcatagtgccggacttgagagtagagacacgtatcagagaacaagagaactgtcc 210
Query: 241 cggagtagc 249
||| ||||
Sbjct: 209 tggaatagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
