ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTAATCTTGTCATACTTTTAACATGAAAGGGTGTCCTATTTTGTCAAAG
GATTTTTCAGCATCTAATGAGATTGTCATGTTTTTTGTTTTGTTTTGTTT
TGTTATAAGTTTATTTATATAGTGGTTTACATTGATGGATTTCTATATTT
TGAACAATCCCTACATCCTTGGCATGAAAACTGTTTGATCATCATGAATG
ATCTTCTGGATGTGTTCTTGGATTTGGTTTACAAGAATTTTTTTGAATAC
TTTTGCATTGATGTTCATATTATAAATTGGTCTGAAGTTCTCTTTGTTGG
GTCCTTGTGTAGATTAGGAATCAGTGTATCTGTGGCTTAATAGAATGATT
AGGTAATGTTTGTTCTGTTTATGTTTTACGAAACAAAGGTCTCATACAAT
TCTGAACTAAAATGATCCAGCCCTGGTTTTGTTTGTTTGTTTGTTTGCTT
GCTTTTGTCTTTGCTTGGGAGACATTTAATGAACGCATGTATTATCTTAT
ATGTTATGGGACTGTTTACATGGTTTACCTGACTGTGATTTACCTCAACT
ACTTCTTACCTGTTTTATAAAACATCCTTTTCTTCTACGATTTCTAGCTT
TGTTAATTTAAGTCTTTTCCTTCAAGATCTCACCACACTTCCTACCTCTC
CTCATGTTCCCCTCTACTTTCCT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTGGTTGGACCTCAGTTAAAAAGAATGCATGT
AGGCCTACTTCAACTAATTGTCCCAGGGTAGGAGGTTGCCAAGTTCACCA
AACTATGAACACATTTAGCTAGAGAATATGTCTCAAGGGGCAAATGTAGA
GAGTGATAGATCTGGACACCAGAAAAACACATTCATAAGTACAGTATTTA
TATATGAAGTTTTCAAAAACATATTTTAAGAGAATTTTTTCAGTGAATTT
TTTTTCTTTTTTAAAATTAGGTATTTTCCTCATTTACATTTCCAATGCTA
TCCCAAAAGTCCCCCATAACCTCCCCCCCCACTCCCCTACCCACCCATTC
CCACTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCA
AGTCCAATGGGCCTCGCTTTCCACTGATGGCCAACTAGGCCATCTTTTGA
TACATATGCAGCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAAT
GTTGTTGCACCTACAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTC
TCTAGCTCCTCCATTGTGGGCCCTGTGATCCATCCAATAGCTGATTGTGA
GTCTCCACTTATGTGTTTGCTAGGCCCCAGCGTAGTCTCACAAGAGACAG
CTATATTAGGATCCTTTCAG

Query= MSMg01no140_l17.g1 MSMg01no140_l17.g1 CHROMAT_FILE:
MSMg01no140_l17.g1 PHD_FILE: MSMg01no140_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:33 2005
         (567 letters)



>mm_chr1_50500257_50501225
          Length = 969

 Score = 1054 bits (545), Expect = 0.0
 Identities = 563/569 (98%), Gaps = 3/569 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctggttggacctcagttaaaaagaatgcatgtaggcctacttcaactaattgtcccaggg 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 ctggttggacctcagttaaaaagaatgcgtgtaggcctacttcaactaattgtcccaggg 260

                                                                       
Query: 61  taggaggttgccaagttcaccaaactatgaacacatttagctagagaatatgtctcaagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggaggttgccaagttcaccaaactatgaacacatttagctagagaatatgtctcaagg 320

                                                                       
Query: 121 ggcaaatgtagagagtgatagatctggacaccagaaaaacacattcataagtacagtatt 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtaaatgtagagagtgatagatctggacaccagaaaaacacattcataagtacagtatt 380

                                                                       
Query: 181 tatatatgaagttttcaaaaa-catattttaagagaatttttt-cagtgaattttttttc 238
           ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tatatatgaagttttcaaaaaacatattttaagagaatttttttcagtgaattttttttc 440

                                                                       
Query: 239 ttttttaaaattaggtattttcctcatttacatttccaatgctatcccaaaagtccccca 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttttaaaattaggtattttcctcatttacatttccaatgctatcccaaaagtccccca 500

                                                                       
Query: 299 taacctccccccccactcccctacccacccattcccactttttggccctggcgttcccct 358
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taacctccccccc-actcccctacccacccattcccactttttggccctggcgttcccct 559

                                                                       
Query: 359 gtactggggcatataaagtttgcaagtccaatgggcctcgctttccactgatggccaact 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtactggggcatataaagtttgcaagtccaatgggcctcgctttccactgatggccaact 619

                                                                       
Query: 419 aggccatcttttgatacatatgcagctagagtcaagagctctggggtactggttagttca 478
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 620 aggccatcttttgatacatatgcagctagagtcaagagctccggggtactggttagttca 679

                                                                       
Query: 479 taatgttgttgcacctacagggttgcagatctctttagctccttggatactttctctagc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taatgttgttgcacctacagggttgcagatctctttagctccttggatactttctctagc 739

                                        
Query: 539 tcctccattgtgggccctgtgatccatcc 567
           |||||||||||||||||||||||||||||
Sbjct: 740 tcctccattgtgggccctgtgatccatcc 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 969
Length adjustment: 10
Effective length of query: 557
Effective length of database: 959
Effective search space:   534163
Effective search space used:   534163
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)