Query= MSMg01no142_m17.b1 MSMg01no142_m17.b1 CHROMAT_FILE:
MSMg01no142_m17.b1 PHD_FILE: MSMg01no142_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:55 2005
(550 letters)
>mm_chr1_118533119_118534068
Length = 950
Score = 190 bits (98), Expect = 3e-52
Identities = 119/130 (91%), Gaps = 8/130 (6%)
Strand = Plus / Minus
Query: 1 tctctcaaagagacaaatgcagagag----aacccttccaagaggccacctgccccaatc 56
|||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||
Sbjct: 326 tctctcaaagagacaaatgcagagagaagaaac----ccaagagggcacctgccctaatc 271
Query: 57 catcctgattgactgtgaggtgtgaaatgtcaggactgcctgactgggcaagacaaatct 116
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 270 catcctgattgactgtgaggtgtgaaatgtcaggactgcctgacagggcaagacaaatct 211
Query: 117 gcaccttggt 126
||||||||||
Sbjct: 210 gcaccttggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no142_m17.g1 MSMg01no142_m17.g1 CHROMAT_FILE:
MSMg01no142_m17.g1 PHD_FILE: MSMg01no142_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:56 2005
(532 letters)
>mm_chr1_118391304_118392235
Length = 932
Score = 998 bits (516), Expect = 0.0
Identities = 528/532 (99%)
Strand = Plus / Plus
Query: 1 aaataaactcttcccattagtggctgtaatccccagtgaagtattactaattatgcatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaataaactcttcccattagtggctgtaatccccagtgaagtattactaattatgcatac 260
Query: 61 accttatatttgtgttctggctttccctggagacttcaaagcactttacaaatattaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accttatatttgtgttctggctttccctggagacttcaaagcactttacaaatattaatt 320
Query: 121 gcaaacaataaataataccttggatttccaagacacccaacactgatgaattaagtgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaaacaataaataataccttggatttccaagacacccaacactgatgaattaagtgttt 380
Query: 181 gcttctctaagtattttaacagttacagcaccactaccacccaagggcaagagtaagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttctctaagtattttaacagttacagcaccactaccacccaagggcaagagtaagcac 440
Query: 241 atctaatatccctgtggaaaaggattgctttctatcatttgccatattttatcaacatga 300
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 441 atctaatatccctgtggaaaaggattgcaagcgatcatttgccatattttatcaacatga 500
Query: 301 acatggatggatatgtgaaggaatggttgtataaactgaggatgcaagatcatggaggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acatggatggatatgtgaaggaatggttgtataaactgaggatgcaagatcatggaggta 560
Query: 361 acagaagtagattttagtatgaaaatcatgatcctgtgttaaccttagccataacatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagaagtagattttagtatgaaaatcatgatcctgtgttaaccttagccataacatatt 620
Query: 421 gtgttaatcagcaataaggatgaatggggtgggcagtttaattcataggcagtgagtcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgttaatcagcaataaggatgaatggggtgggcagtttaattcataggcagtgagtcta 680
Query: 481 taattgggagctagggagttggttttgatgtgcctcattgactgattcccaa 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taattgggagctagggagttggttttgatgtgcctcattgactgattcccaa 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
