Query= MSMg01no143_g16.b1 MSMg01no143_g16.b1 CHROMAT_FILE:
MSMg01no143_g16.b1 PHD_FILE: MSMg01no143_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:58 2005
(213 letters)
>mm_chr1_17449278_17449889
Length = 612
Score = 368 bits (190), Expect = e-106
Identities = 207/214 (96%), Gaps = 5/214 (2%)
Strand = Plus / Plus
Query: 1 caagagaaaag-atttagccataaacaaatggttgtgtatagttttgcagaa-atatatt 58
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 caagagaaaagtatttagccataaacaaatggttgtgtatagttttgcagaatatatatt 260
Query: 59 ttttgagtaatattattctctacctgattgcaaaatcttttttttttttaggaaagtctt 118
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 261 ttttgagtaatattattctctacctgattgcaaaatcatttttttt---aggaaagtctt 317
Query: 119 catttcaggcagagaattcaaaattcatatcagttacattttatgctttgtgctagcaaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 catttcaggcagagaattcaaaattcatatcagttacattttatgctttgtgctagcaaa 377
Query: 179 tctataaaatgaatggtgatatattagggaagga 212
||||||||||||||||||| ||||||||||||||
Sbjct: 378 tctataaaatgaatggtgacatattagggaagga 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 612
Length adjustment: 9
Effective length of query: 204
Effective length of database: 603
Effective search space: 123012
Effective search space used: 123012
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no143_g16.g1 MSMg01no143_g16.g1 CHROMAT_FILE:
MSMg01no143_g16.g1 PHD_FILE: MSMg01no143_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:58 2005
(343 letters)
>mm_chr1_17589185_17589927
Length = 743
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%)
Strand = Plus / Minus
Query: 1 tggttccaagcagacattttgccagaagtatttgaaatactttggatgttattttaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tggttccaagcagacattttgccagaagtatttgaaatactttggatgttattttaattt 484
Query: 61 aaaaatacttacaaaattaagaggcatggatccaagttgccagtaagagaactattaatg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaaagtacttacaaaattaagaggcatggatccaagttgccagtaagagaactattaatg 424
Query: 121 aacagctaacaatgaggtggttctttattgagcttttcttgaaagggactggtgatgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aacagctaacaatgaggtggttctttattgagcttttcttgaaagggactggtgatgtgt 364
Query: 181 tttgaagccttaagaaaactgtttgccaatagagacagaagtggagtgaacttatatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttgaagccttaagaaaactgtttgccaatagagacagaagtggagtgaacttatatact 304
Query: 241 gaaaagaaatatgtagacaatcagaagcatgttggaacttggaagaaaatagttgggatt 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gaaaagaaatatgtagacattcagaagcatgttggaacttggaagaaaatagttgggatt 244
Query: 301 ctaaaagggaaattgatggccctaagtggtacacctgcttgat 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctaaaagggaaattgatggccctaagtggtacacctgcttgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
