Query= MSMg01no143_i11.b1 MSMg01no143_i11.b1 CHROMAT_FILE:
MSMg01no143_i11.b1 PHD_FILE: MSMg01no143_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:07 2005
(373 letters)
>mm_chr1_71485502_71486274
Length = 773
Score = 661 bits (342), Expect = 0.0
Identities = 364/372 (97%), Gaps = 2/372 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctggaaaagttcttgtttctcctctcagcatctgcataacttctggcttagca 63
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 495 ggaattcctggaaaagtttttgtttctcctatcagcatctgcataacttctggcttagca 436
Query: 64 ttagaattcaagatttttcactgctcttaaaaatttgcataaagaaaagacctttggatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttagaattcaagatttttcactgctcttaaaaatttgcataaagaaaagacctttggatg 376
Query: 124 atttgatggttcatagtatttggtaatgagcagagaaaaaatattttatatcatgaaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atttgatggttcatagtatttggtaatgagcagagaaaaaatattttatatcatgaaaag 316
Query: 184 attactttaatagttactgaaattcatctttagatttctggcaaaacatatacccacgtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 315 attactttaatagttactgaaattcatctttagatttctggcaaaacatatacccacatg 256
Query: 244 tcttgtttaatgtatggctatctagatacatttatgaaaagcaccttcctctctagggaa 303
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 255 tcttgtttaatgtatggctatctagatacatttaggaaaagcaccctcctctctagggaa 196
Query: 304 tgaacccaggactttttgttaaaaa--gtactctgtaactgagccaaatccccaactttt 361
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 195 tgaacccaggacttttttttaaaaaaagtactctgtaactgagccaaatccccaactttt 136
Query: 362 aaacatccccca 373
||||||||||||
Sbjct: 135 aaacatccccca 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_i11.g1 MSMg01no143_i11.g1 CHROMAT_FILE:
MSMg01no143_i11.g1 PHD_FILE: MSMg01no143_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:07 2005
(225 letters)
>mm_chr1_71391315_71391941
Length = 627
Score = 416 bits (215), Expect = e-121
Identities = 224/227 (98%), Gaps = 2/227 (0%)
Strand = Plus / Plus
Query: 1 ttttttaaa-ggataatttagcgtaggggtgaattcaatgttttctaattaaagactgat 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttttaaagggataatttagcgtaggggtgaattcaatgttttctaattaaagactgat 260
Query: 60 cagctttaagatgttatgcactggccacataaagctgttgaaacctaacacattggcatt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 cagctttaagatgttatgcactggccacataaagctgttgaaacctaacacagtggcatt 320
Query: 120 cccctttggagatttatttttaattatttgtgacagagagtattatgtgcacattagtga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccctttggagatttatttttaattatttgtgacagagagtattatgtgcacattagtga 380
Query: 180 aggtgtccctggagac-agaggaaggtgttggatcctctggaattgg 225
|||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 aggtgtccctggagaccagaggaaggtgttggatcctctggaattgg 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 627
Length adjustment: 9
Effective length of query: 216
Effective length of database: 618
Effective search space: 133488
Effective search space used: 133488
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
