XXXXXXXXXXXXXXXXXXXXXXXXTCCCNAAAGGATCCGCGNNNAATTCA
AGTCCTTCACCGCNNNTGTGACGAGAGCACNTTTCCAAACTGAACTGTCT
TTGCATCCAGAGCTCTTTGCTAANCAAANAGAACCGAAAACAGGCAAAAT
ACGTTCTCAACTTCCCAACCAATTCCAATTGTTCAGGGAAAAGGACCTTT
CACCATCCCCACCCATTTTAAAAAAAAACCCCCCTCAAAAAAAAAAAGGG
TTGAAAACCCCCCCCCCCCTGGAAAAAAAAAAACCTCCCGGGGGGGGGGG
GGGGGGGTCTTNNNNNNNNNNNNNNNNNNNNNGNTNNNNNNNNNNNNNNT
NNNNNNNANNNNNNNNTNTGGGTGGGGGGTGGGGGGCTGNNNNNNNNNNN
NAANNNNNNAANNNNNNNNANANANANNNNNNNAAAAAATTTTGATTTTG
TGTTAGGGGGCTGGNNNANNNANNNAANNANNAAAAANNAAAAAACAAAA
TTTTTATNNNNNNNNTTNTNTTTATTTTTGATATTAGTTGTTGTGGTT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAACTACGACAACTCAACAAGGTAGAG
GGATCCTAGGAAAACCTACCGGTAGCATTGTCCTCTTAAACAGGCAGACC
TTTTAAAACACACCTTTTCCTTGACAAACATAGCAGCAGGTCAGTCTTGT
ACCACTGATAATATACCTAGGGGTCGGGGGTGGGGGGAGCATGCCACCCT
TCCAGGTCCCATGTTGCATGAGGTACAAATAATGGGGTCTGTCTCCTCCA
CCTGCAGTAGTCAAAGTGTTAGTCACTAAGAGGTCCCATGGTCACACCTA
CAAGCTGAAGCCAAACTGCTGGTGCCCAACTGGATTAGGTGAGCTACAAG
GTCCACATGCTCCCCCCTAAGTGATGTGACCTGGGAAAGTATCTAGAATG
TACCTTCCCCTCATGATATTTCATGGCTAAGCATCCTGACTGCATCCACT
TCAGAATCGCTAAGTCTCCTCCTGTTGTGTCCTCATGAAGGTTGAGGGAA
GTTGAAGCACTCTTCTCCTATGCACTGTGTCTGTGAGTAAGCGGCTTCCG
CCCCGTTTATACTTTTTGCACCTTAATTTTTTCATTAATATTGACCTGTG
TTTTTTAACATTAACATATTGTTATTTTTTTAATATCTGTGTATTATCTT
ATATGAACTTCG

Query= MSMg01no143_j19.g1 MSMg01no143_j19.g1 CHROMAT_FILE:
MSMg01no143_j19.g1 PHD_FILE: MSMg01no143_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:13 2005
         (327 letters)



>mm_chr1_34672136_34672862
          Length = 727

 Score =  594 bits (307), Expect = e-174
 Identities = 322/327 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaactacgacaactcaacaaggtagagggatcctaggaaaacctaccggtagcattgtcc 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaccacgacaactcaacaaggtagagggatcctaggaaaacctaccggtagcattgtcc 260

                                                                       
Query: 61  tcttaaacaggcagaccttttaaaacacaccttttccttgacaaacatagcagcaggtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttaaacaggcagaccttttaaaacacaccttttccttgacaaacatagcagcaggtca 320

                                                                       
Query: 121 gtcttgtaccactgataatatacctaggggtcgggggtggggggagcatgccacccttcc 180
            |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 atcttgtaccactgataatatacctaggggtcgggtgtggggggagcatgccacccttcc 380

                                                                       
Query: 181 aggtcccatgttgcatgaggtacaaataatggggtctgtctcctccacctgcagtagtca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtcccatgttgcatgaggtacaaataatggggtctgtctcctccacctgcagtagtca 440

                                                                       
Query: 241 aagtgttagtcactaagaggtcccatggtcacacctacaagctgaagccaaactgctggt 300
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatggtagtcactaagaggtcccatggtcacacctacaagctgaagccaaactgctggt 500

                                      
Query: 301 gcccaactggattaggtgagctacaag 327
           |||||||||||||||||||||||||||
Sbjct: 501 gcccaactggattaggtgagctacaag 527


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space:   228324
Effective search space used:   228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)