TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTAGGTACTCCACTCAGTTGCAATTAGAAAAGACCAAGCTCAGGCTTT
GAGCTCCAGGTGTGGGGGAGTTGGCTTTGAGAATTAGCAGAAAGGCCAGA
GATTCTCTGGAAGTGGAGGCTGAGCTCTAAATTAACTTTACTAGGTATTA
AGAATTTTAGCTATCTTCAATAGGAATCTCTAATATTGGAATTATTACTA
GACCAGTCTAAGATTGAGTTAGAATAACTGGTCACATTGAAGAAAAGAGA
AAAATCATTATGACTATATTATAAGACTAATCTTTCTAAGTCAGAATATA
CAGTCTCTGATGTTCTTTTTGCCATAAAGTTAAAAAGCTTGAAGCAAGGC
AGCTTCACAACTCCAAACTGCAAAAAATGGCAAGCAAGGATGGGTCAAAA
ACATGTACGTAATTTAGTTTTCTTACCACTTCAGTCAAGGCACTGAGCCA
ACTCACCTGCCAGCTTGTCACACGAATAAGCCATCATGCTTCTACAGCAT
TCTGTGGAGAGAACCTATGTTTTTCCCTTCCCTAATAAGGTTGCTGTTCA
GAATCAAGCCATATGCCAATAAGTAGATCCTTTTAAGATACTATAAAGCA
TTTATTAAGTTCTTTGACATCCAAATTTCAAAA

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTTTGTAGACCAGGCTGGCCTTGAAC
TCAGAAATCTGGCTGCCTCTGCCTCCCAAGAGCTGGGATTAAAGGCATGT
GCCACCACTGCCCAGCAACAGCACCATTTTCATTCCTGCCTTTCTCAGCA
CCCTCCTGATGCTGAGGCTGTACTTTGGCAGTCATGATTGTTTATTTTGT
TTTAAAATTTGCTATCATGATGTGTGTTGTCAGATATTATTATATTATTT
TATTGTCAATTTCTTCTTCTAAATAATACACAATTCTGTATCATGAAAAA
AAATGTTTATAAGAATATTTTCTTTGACCTTTTATTATGATAATCAGCAT
GACAATTTTTTTACAAACACCATGTGTGTTATATATTAATTTCATAATAT
AGGCGACTTACTAGAAATGCAGAAGAATGCTGCATGAACATAAACTGCAG
TTCATAGGCTATGAGGCTTTGGATGGGACTAAGGGTGAACTTTCAGTATC
TCCTATAATAAATACCTTTCACATTGGCACTTTTATACATGAAAAGCATG
GTTGTTGGTGAACTATCTCTGCAAGAAAGGGGTTTTTGAAATATTCAGAA
TAATACCTGTCAGGAAATAACCTTTATTAAACAA

Query= MSMg01no143_k20.g1 MSMg01no143_k20.g1 CHROMAT_FILE:
MSMg01no143_k20.g1 PHD_FILE: MSMg01no143_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:18 2005
         (605 letters)



>mm_chr1_105751825_105752830
          Length = 1006

 Score = 1065 bits (551), Expect = 0.0
 Identities = 569/575 (98%), Gaps = 1/575 (0%)
 Strand = Plus / Minus

                                                                        
Query: 32   aaatctggctgcctctgcctcccaagagctgggattaaaggcatgtgccaccactgccca 91
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 aaatctggctgcctctgcctcccaagagctgggattaaaggcatgtgccaccactgccca 947

                                                                        
Query: 92   gcaacagcaccattttcattcctgcctttctcagcaccctcctgatgctgaggctgtact 151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946  gcaacagcaccattttcattcctgcctttctcagcaccctcctgatgctgaggctgtact 887

                                                                        
Query: 152  ttggcagtcatgattgtttattttgttttaaaatttgctatcatgatgtgtgttgtcaga 211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886  ttggcagtcatgattgtttattttgttttaaaatttgctatcatgatgtgtgttgtcaga 827

                                                                        
Query: 212  tattattatattattttattgtcaatttcttcttctaaataatacacaattctgtatcat 271
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 826  tattattatattattttattgtcaatttcttcttcaaaataatacacaattctgtatcat 767

                                                                        
Query: 272  g-aaaaaaaatgtttataagaatattttctttgaccttttattatgataatcagcatgac 330
            | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 766  gaaaaaaaaatgtttataagaatactttctttgaccttttattatgataatcagcatgac 707

                                                                        
Query: 331  aatttttttacaaacaccatgtgtgttatatattaatttcataatataggcgacttacta 390
            ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706  aatttttttacaaacattatgtgtgttatatattaatttcataatataggcgacttacta 647

                                                                        
Query: 391  gaaatgcagaagaatgctgcatgaacataaactgcagttcataggctatgaggctttgga 450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646  gaaatgcagaagaatgctgcatgaacataaactgcagttcataggctatgaggctttgga 587

                                                                        
Query: 451  tgggactaagggtgaactttcagtatctcctataataaatacctttcacattggcacttt 510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586  tgggactaagggtgaactttcagtatctcctataataaatacctttcacattggcacttt 527

                                                                        
Query: 511  tatacatgaaaagcatggttgttggtgaactatctctgcaagaaaggggtttttgaaata 570
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 526  tatacatgaaaagcatggttgttggtgaactatctctgcatgaaaggggtttttgaaata 467

                                               
Query: 571  ttcagaataatacctgtcaggaaataacctttatt 605
            |||||||||||||||||||||||||||||||||||
Sbjct: 466  ttcagaataatacctgtcaggaaataacctttatt 432


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1006
Length adjustment: 10
Effective length of query: 595
Effective length of database: 996
Effective search space:   592620
Effective search space used:   592620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)