Query= MSMg01no144_p09.b1 MSMg01no144_p09.b1 CHROMAT_FILE:
MSMg01no144_p09.b1 PHD_FILE: MSMg01no144_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:55 2005
(687 letters)
>mm_chr1_147282912_147283998
Length = 1087
Score = 1282 bits (663), Expect = 0.0
Identities = 678/683 (99%)
Strand = Plus / Plus
Query: 5 gaattcaatcacagctacgtctatatgtcaaattgaagactagccagaacacataatgaa 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcacagctaggtctatatgtcaaattgaagactagccagaacacataatgaa 264
Query: 65 atcctatatcaaaagaaacaaagaaattaaactattaatgctatcttagatctatctctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcctatatcaaaagaaacaaagaaattaaactattaatgctatcttagatctatctctt 324
Query: 125 tgataacatgcttaagagattctttctaaaatctattatttgcatatactttccggtgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgataacatgcttaagagattctttctaaaatctattatttgcatatactttccggtgaa 384
Query: 185 ataaatattccaaaattaaatgatttcaccatgtcaaagatactataaagtggattaaca 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ataaatattccaaaattaagtgatttcaccatgtcaaagatactataaagtggattaaca 444
Query: 245 tattctacattgttgttatttctgggatcatttcatcatgtagataagcctggcaagggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tattctacattgttgttatttctgggatcatttcatcatgtagataagcctggcaagggt 504
Query: 305 catcatcagtgcattccataaaatactttagcattttcttctttctgggattttcaggtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catcatcagtgcattccataaaatactttagcattttcttctttctgggattttcaggtt 564
Query: 365 aataataaccacacaaaaacttcaatattttatactgttttgcaactttaaaatcttctt 424
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aataataagtacagaaaaacttcaatattttatactgttttgcaactttaaaatcttctt 624
Query: 425 ctattacttttctttttatatttttagttattttcctttgtgtgttagtgctataaaggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctattacttttctttttatatttttagttattttcctttgtgtgttagtgctataaaggg 684
Query: 485 tcattctctcatgccatagtatatattggatatcagaagacaacttatgagaattatgtc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcattctctcatgccatagtatatattggatatcagaagacaacttatgagaattatgtc 744
Query: 545 tcttcttctccagtgtggattctgtgagttgaactcagattgtaaggcttgacaggaaac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcttcttctccagtgtggattctgtgagttgaactcagattgtaaggcttgacaggaaac 804
Query: 605 cctgtaattcatggaaccttctacatgcctttataattcttgaaactcattaccattttc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cctgtaattcatggaaccttctacatgcctttataattcttgaaactcattaccattttc 864
Query: 665 acaccagttgaactccttgttgt 687
|||||||||||||||||||||||
Sbjct: 865 acaccagttgaactccttgttgt 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_p09.g1 MSMg01no144_p09.g1 CHROMAT_FILE:
MSMg01no144_p09.g1 PHD_FILE: MSMg01no144_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:55 2005
(341 letters)
>mm_chr1_147433016_147433756
Length = 741
Score = 565 bits (292), Expect = e-165
Identities = 322/342 (94%), Gaps = 17/342 (4%)
Strand = Plus / Minus
Query: 1 tccattggagtccctgtgctcactcagcctgatggatggctgtggattggaaaagttctt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 593 tccattggagtccctgtgctcactcagcctgatggatggctgtgaattggaaaagttctt 534
Query: 61 tactaattctacatctgataggggactaatatccaatatgtacaaaaaactcaagaagtt 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 533 tactaattctacatctgataggggactaatatccaatatgtacaaagaactcaagaagtt 474
Query: 121 acacgtcagagggggaaaagtgtatgttttacattactaagaagtaatgataaaattaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 473 acacgtcagagggggaaaagtgtatgttttacattactaagaagtaatgataaaagtaag 414
Query: 181 atgtataactccttcagaacaataatatattaattatcccataaagattcattatgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atgtataactccttcagaacaataatatattaattatcccataaagattcattatgtttt 354
Query: 241 tgtaatagaatcaacttaagttttgttatttatttatttatttatttatttatttattta 300
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 353 tgtaatagaatcaacttaagttttg----------------ttatttatttatttattta 310
Query: 301 tttatgatatt-aaaaaataatcaatcactatggaatacata 341
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 309 tttatgatattaaaaaaataatcaatcactatggaatacata 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
