Query= MSMg01no145_b19.b1 MSMg01no145_b19.b1 CHROMAT_FILE:
MSMg01no145_b19.b1 PHD_FILE: MSMg01no145_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:07 2005
(236 letters)
>mm_chr1_80611261_80611897
Length = 637
Score = 362 bits (187), Expect = e-104
Identities = 205/211 (97%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 1 cccacagtgaaag-acctaaaacaatatggagcagatataaatactgcacaggacttggt 59
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 cccacagtgaaagtacctaaaacaatatggaacagatataaatactgcacaggacttggt 260
Query: 60 cagagatcttatgaaccatgttgggctttcccagtgtcatggttgacaggacagctcagt 119
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 261 cagagatcttatgaaccatgttgggttttcccagtgccatggttgacaggacagctcagt 320
Query: 120 gatggttgatgcaacaatgagcaaatggttcgtctgcggtgacgcctcgaaatagagaag 179
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 321 gatggttgatgcaacaatgagcaaatggttcgtctgcggcgatgcctcgaaatagagaag 380
Query: 180 atcaggtctcattccaaactcagactaaaca 210
|||||||||||||||||||||||||||||||
Sbjct: 381 atcaggtctcattccaaactcagactaaaca 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 637
Length adjustment: 9
Effective length of query: 227
Effective length of database: 628
Effective search space: 142556
Effective search space used: 142556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no145_b19.g1 MSMg01no145_b19.g1 CHROMAT_FILE:
MSMg01no145_b19.g1 PHD_FILE: MSMg01no145_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:07 2005
(307 letters)
>mm_chr1_80750500_80751207
Length = 708
Score = 580 bits (300), Expect = e-170
Identities = 306/308 (99%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 1 ctagaaagaa-aatgtcctcccctctgagctttgtgacatttaaatagtggagagtatga 59
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 508 ctagaaagaagaatgtcctcccctctgagctttgtgacatttaaacagtggagagtatga 449
Query: 60 gagacttctgaaagttgaacagagtttgagatttcccaaaggttaagttagaaggaagta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gagacttctgaaagttgaacagagtttgagatttcccaaaggttaagttagaaggaagta 389
Query: 120 gaaagttgttgagccattgaataaaaacaaagcattatttttactgtgaatgtccagcat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gaaagttgttgagccattgaataaaaacaaagcattatttttactgtgaatgtccagcat 329
Query: 180 ttaaaagcaatatgcaatatgcctgtttatttagcatcttaggcacaaacagcccttaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttaaaagcaatatgcaatatgcctgtttatttagcatcttaggcacaaacagcccttaaa 269
Query: 240 aaaaaagatttgtttaattgtttatgatttttatgtgtctgtgtggctgcaagagttaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaaaaagatttgtttaattgtttatgatttttatgtgtctgtgtggctgcaagagttaat 209
Query: 300 gcacatta 307
||||||||
Sbjct: 208 gcacatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 708
Length adjustment: 9
Effective length of query: 298
Effective length of database: 699
Effective search space: 208302
Effective search space used: 208302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
