NCCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGGACTTCTCGAAGAGTAGTCAGTGCTCTTAAACACTGGTCC
ACCTCTCCAGCTCTTGTCGGTCAGCTTTTTAATAACACAATCAGAAGGTG
AGAGAGGGAGTATTTACAAAACACTGAGACAGGAGATGCTTAACAATTTC
TAAGTCCCACCTGTAACTGGATCTCTGCCAGTTCAGAAATCAGCATTATT
ATAATACAGAGACAACCTGTATATCTCTGGGTCAACCTGGTCTACAAAGT
GAGTTCTAGAACAGCCAGGGCTTTTTACACAGAAAAATCCTGTCTTGAAA
AGCTAAATCAATAAAAAATAAAATAAACAAATAAACAAACAAAGAATTAA
GTCAGTCTTGAAACCATATACACACAAACAATAAAGACTCAGCAAACTGT
ATTTTAATGTATTTGAACATATACATTCATATATGTATACATGGACATAT
ACATACGTACATGTATGTGAATGTATTAGTCAGTACTATATTGCTATGAG
GAGACACTATGACCATGGCAACTATTACAAAAGAAAACATTTAATTGGCG
CTTGTTTACAGTTTCAAAAAATAGGTTTTCTCCATAGATAGAATAAGCCA
ATTCAAACCGAATTAAGAGTTGAAAAGGGCAGGTTTACCCTTGGCAA

NCCCCGATATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGATCTGCCTGGAGTGGAGTGAC
AGGCAGGGAGGCAAAGGATTAACACTGGAGATCATGGGAAGGGTGTGTCC
ACTGTCCCCTTCCTAACCTGGGGATCTATTCCCCCAGTGGTCTCATTTTA
ACCTTTAGGAAGTGTTCTCAAACTGCATTGGGGTGAAGGTTATCCTGAAA
AAAATTGCTAGAAGTTATTAAATTAACAACAACAACCAGAGCTGGCATCT
TTGAAATGTCTAGAATTTGTCAGGATCACTATGTGAGAAAATTGAAATAA
AACAAAAGGCAACCAAGTGACTTTCGAATGAGTCTGAGGTAGGGTCTCTG
AGTGTTCAACTGAGAAGAGCTCTATGTAACCCCGTCTAATATTTCCCAAA
TATGTTTGATCCACAAGACACCCCAATTCCCCACCCCCAGGATACCCACG
AGGCCTCTAGGACTTTAGATTTGAACCAAGGCTAGCCCACTGTATTAGTC
AGGGTTCTCTAGAGTCACAGAACTTATGGACAGTACCTAGATAGTAAAGG
TATTCATTGATGACTTACAGTTGGCAGCCCAATTCCCAACAATTGTTCAG
TCGCAGCTGTGAATGGAAGTTCCAGGGATCTAGCAGTTACTCAGTC

Query= MSMg01no145_h02.g1 MSMg01no145_h02.g1 CHROMAT_FILE:
MSMg01no145_h02.g1 PHD_FILE: MSMg01no145_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:31 2005
         (472 letters)



>mm_chr1_87495328_87496199
          Length = 872

 Score =  766 bits (396), Expect = 0.0
 Identities = 452/484 (93%), Gaps = 21/484 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatctgcctggagtggagtgacaggcagggaggcaaaggattaacactggagatcatgg 60
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 180 agatctgcctggagtggagtgagaggcagggaggcaaaggattaacactggagaacatgg 239

                                                                       
Query: 61  gaagggtgtgtccactgtccccttcctaacctggggatctattcccccagtggtctcatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaagggtgtgtccactgtccccttcctaacctggggatctattcccccagtggtctcatt 299

                                                                       
Query: 121 ttaacctttaggaagtgttctcaaactgcattggggtgaaggttatcctgaaaaaaattg 180
            ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtaacctttaggaagtattctcaaactgcattggggtgaaggttatcctgaaaaaaattg 359

                                                                       
Query: 181 ctagaagttattaaattaacaacaacaac---------------------cagagctggc 219
           |||||||||||||||||||||||||||||                     ||||||||||
Sbjct: 360 ctagaagttattaaattaacaacaacaacaacaacaacaacaacaacaaccagagctggc 419

                                                                       
Query: 220 atctttgaaatgtctagaatttgtcaggatcactatgtgagaaaattgaaataaaacaaa 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atctttgaaatgtctagaatttgtcaggatcactatgtgagaaaattgaaataaaacaaa 479

                                                                       
Query: 280 aggcaaccaagtgactttcgaatgagtctgaggtagggtctctgagtgttcaactgagaa 339
           |||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 480 aggcaaccaagtgactctcgaaagagtctgagctagggtctctgagtgttcaactgagaa 539

                                                                       
Query: 340 gagctctatgtaaccccgtctaatatttcccaaatatgtttgatccacaagacaccccaa 399
           ||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 540 gagttctatgtaaccccgtctaatatttcccaaatgtatttgatccacaagacaccccaa 599

                                                                       
Query: 400 ttccccacccccaggatacccacgaggcctctaggactttagatttgaaccaaggctagc 459
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 600 ttccccacccccaggatacccacgaggcctctgggactttagatttgaaccaaggctagc 659

               
Query: 460 ccac 463
           ||||
Sbjct: 660 ccac 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space:   398244
Effective search space used:   398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)