NTCTAAATTTGCGGCGCTATACGATCACTTATCAGACGAATCCGCGGAAT
TCTACTGTTTCCTGACAGAGCTAACATCCACCTAGAACAGAAAACTAAAG
GGAAATAGAAATATGTGGCTTGCCCTGATCTTTGCAATCAAGGCCCTTTC
TTGTCTTTTGTCTTCCTTGGATTGAGGTCTGACAGTGAGAGCTTAAACTA
GGAGTGAGCCTGGGCACAGCTTTCTTGGTGACAAGTCCTGCCAGACAGGT
AGGAGAAACAGGGCAGCGGGTGCCAACTGTTTACCCAGCATCGTCTGTTA
TTTGGACTTCTTCCCTGATTTGACTTTCCTGCAGGAGTCCTGCTCTAATG
CAGAGAGAGGCAGAGGGACTGAGACCGCTTGGGTCACAAGATAATAACAG
AACCATGCCACAGGACTCCCTGTCAGCTGTGGCCAAAGTCTCCCTCTGAC
AGCTGAGCAGTGGTCATAAAGACAGTTATGACTTGTGTACAATCTGGCAA
GCTTGTCTCTCTCGGCAGCGGATATCAAACTCAAGTGTTCAGGTATGCTG
ATGTTCTCTCTCTTTCTCTCTCTGTGTCTGTCTGTCTGTCTGTCTGTCTG
TCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGTCTGTCTCTTCGCCTCAT
CACCCCCAAATCTATCCCCTCTTATTATAGGCCAAAGCTACTTCATGTCA
GGCGGGTTG

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTGTGTCCTCAGTCTGATAAGACTT
TATTGAAAGCCTGGTTCATATGGAACGTGTGAGATATTTTCAGCCACTTC
AACTGTAGCAATCTCCCTTCTACACCTTGTGACACTTTCTTTCTAACTTG
TAACAGTTGCAGAAGGCATGAGTCATTGCAATTCCTAGACATAGCCTCCC
CACAATATGCAAACCATTATCACAAGGTGCCGCCCAGTGTTCGTTTCCTC
CTCTGGGTATCCAGGCTCATTACACACCAACTAAACGGGGGCAGGTAGGT
GCAATACAGGATCTTAGTTGATGGTGAGAGCACAAGAAACAAACAGCCTT
CTCAGGAGACAGCTCCTTTAATTGGAGCAGAAGAAAGGCCATTTATATCT
TTGGGGAATGGGTAGAGGCTTTTGAGGGGAATAGACATCATTGACCAGAG
CCAGGGTTCTGGGAATGCCTTATTTGCATGAAGAGGAATCCCAGGTGCTT
GCCAAATGTGACCTTATAAGGAGAGAGGAAGTTGAACCTGTAACCTGGCT
GCCAGGCTAAAGGGCCACCTCAGGGTTGGCAGAGGTTGGGAGTGTAAGGC
TACGTGGACCTGGACGTGCAGGCCCAGGGCAGGAAAGGAACAGTCCTATT
CCTGCTGGTCC

Query= MSMg01no145_k03.g1 MSMg01no145_k03.g1 CHROMAT_FILE:
MSMg01no145_k03.g1 PHD_FILE: MSMg01no145_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:47 2005
         (637 letters)



>mm_chr1_87343485_87344521
          Length = 1037

 Score = 1183 bits (612), Expect = 0.0
 Identities = 630/636 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgtgtcctcagtctgataagactttattgaaagcctggttcatatggaacgtgtgaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgtgtcctcagtctgataagactttattgaaagcctggttcatatggaacgtgtgaga 260

                                                                       
Query: 61  tattttcagccacttcaactgtagcaatctcccttctacaccttgtgacactttctttct 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 tattttcagccacttcaactgtagcaatctcccttctacaccttgtgacactctctttct 320

                                                                       
Query: 121 aacttgtaacagttgcagaaggcatgagtcattgcaattcctagacatagcctccccaca 180
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 321 aacttgtaacagttgcagaaggtatgagtcattgcaattcctagacatagcctccccata 380

                                                                       
Query: 181 atatgcaaaccattatcacaaggtgccgcccagtgttcgtttcctcctctgggtatccag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatgcaaaccattatcacaaggtgccgcccagtgttcgtttcctcctctgggtatccag 440

                                                                       
Query: 241 gctcattacacaccaactaaacgggggcaggtaggtgcaatacaggatcttagttgatgg 300
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcattacacaccaactaaatgggggcaggtaggtgcaatacaggatcttagttgatgg 500

                                                                       
Query: 301 tgagagcacaagaaacaaacagccttctcaggagacagctcctttaattggagcagaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagagcacaagaaacaaacagccttctcaggagacagctcctttaattggagcagaaga 560

                                                                       
Query: 361 aaggccatttatatctttggggaatgggtagaggcttttgaggggaatagacatcattga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggccatttatatctttggggaatgggtagaggcttttgaggggaatagacatcattga 620

                                                                       
Query: 421 ccagagccagggttctgggaatgccttatttgcatgaagaggaatcccaggtgcttgcca 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 ccagagccagggttctgggaatgccttatttacatgaagaggaatcccaggtgcttgcca 680

                                                                       
Query: 481 aatgtgaccttataaggagagaggaagttgaacctgtaacctggctgccaggctaaaggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatgtgaccttataaggagagaggaagttgaacctgtaacctggctgccaggctaaaggg 740

                                                                       
Query: 541 ccacctcagggttggcagaggttgggagtgtaaggctacgtggacctggacgtgcaggcc 600
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcacctcagggttggcagaggttgggagtgtaaggctacgtggacctggacgtgcaggcc 800

                                               
Query: 601 cagggcaggaaaggaacagtcctattcctgctggtc 636
           ||||||||||||||||||||||||||||||||||||
Sbjct: 801 cagggcaggaaaggaacagtcctattcctgctggtc 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)