NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGG
AATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGCAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTTGTCTT
TTTGTCTTATTGACTGTGTCTTTTGCCTTGCAGAAGCTTTGCAGTTTCAT
GAGGTCCCATTTGTCAATTCTCGATCTTATAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGTCCATATCTTCAAGGCTTTTCCCCACT
TTTTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGAT
CCACTTAGGTTTGACTTTCACACAAGGAGATAGGAATGGATTGATTCTCA
TTCTTCTACATGATAACAGCCAGTTGTGCCAGCACCATTTGTTTAAAATG
CTGTCTTTCTTCCACTGGATGTTTTTAGCTCCCTTGTTGAAAATCAAGTG
ACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTTGT
CTACTTGTCTGTCACTGTACCAGTACCATGCAGTTTTTATCACATTTGCT
CTTTATTAAAGCTTTTTGTCAGGCATGCTGATTCCACCATAGGTTGTTTT
ATCCTTGC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGTAAAGGGTTGAATGGCAATCCTTTT
GCCTGGTCTAGCATTCTTTTTACATTCTGACATCTGGCGCCTATTACCAG
AACAAATTAGAGCAGCTCTAAGCAGGGGATGCAGATGAGAACTTCCTGTT
CTAGGCTACTGAGCCAGTAAACAGAAGAACTGAGACTCAAACAAAGCAGC
CATAGAAATAGATTTGTATTGCTTGCATCGACTTAAAGTCCCTTGTAAGT
AAAGCTAAATAACAGAGATAGTCTATTACAAAGTAACTGTGCTGTTGATG
TTTCTGATTAATTTTACTTTATAGTAGGAAATTAAAATGATTCTGTGGGA
GCTCATTAAAAAAAAACAAACAAGGATTATATCGATAGTCATGGTTTTGT
TTAGTTTTATCAGAACAAAGAATAACTTTGTGCCAATTTAATCCGTGCTA
CTAAAATGATTTAATGAATCTACAGCTATTTCAAAATTTTCATCACTTGT
TAAAACTTCTTTCTATTTAGTTATCCCTATTTCTTTCTTAGAGTGTTTGT
TTGTATTTTTTGTTTTTGTTTTTTTTTGTCAATTGGTATTTTATATTCAA
ATTAGGTTTCTATTCCATATATTCTGACTACATTTCCCCCTCCTCCTATC
CTTCCAGA

Query= MSMg01no145_o12.g1 MSMg01no145_o12.g1 CHROMAT_FILE:
MSMg01no145_o12.g1 PHD_FILE: MSMg01no145_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:08 2005
         (558 letters)



>mm_chr1_112917146_112918103
          Length = 958

 Score = 1025 bits (530), Expect = 0.0
 Identities = 548/554 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtaaagggttgaatggcaatccttttgcctggtctagcattctttttacattctgacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaaagggttgaatggcaatccttttgcctggtctagcattctttttacattctgacat 260

                                                                       
Query: 61  ctggcgcctattaccagaacaaattagagcagctctaagcaggggatgcagatgagaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggcgcctattaccagaacaaattagagcagctctaagcaggggatgcagatgagaact 320

                                                                       
Query: 121 tcctgttctaggctactgagccagtaaacagaagaactgagactcaaacaaagcagccat 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgttctcggctactgagccagtaaacagaagaactgagactcaaacaaagcagccat 380

                                                                       
Query: 181 agaaatagatttgtattgcttgcatcgacttaaagtcccttgtaagtaaagctaaataac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaatagatttgtattgcttgcatcgacttaaagtcccttgtaagtaaagctaaataac 440

                                                                       
Query: 241 agagatagtctattacaaagtaactgtgctgttgatgtttctgattaattttactttata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagatagtctattacaaagtaactgtgctgttgatgtttctgattaattttactttata 500

                                                                       
Query: 301 gtaggaaattaaaatgattctgtgggagctcattaaaaaaaaacaaacaaggattatatc 360
           |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 501 gtaggaaactaaaatgattctgtgggatctcattaaaaaaaaaaaaacaaggattatatc 560

                                                                       
Query: 361 gatagtcatggttttgtttagttttatcagaacaaagaataactttgtgccaatttaatc 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatagtcatggttttgtttagttttatcagaacaaagaataactttgtgccaatttaatc 620

                                                                       
Query: 421 cgtgctactaaaatgatttaatgaatctacagctatttcaaaattttcatcacttgttaa 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catgctactaaaatgatttaatgaatctacagctatttcaaaattttcatcacttgttaa 680

                                                                       
Query: 481 aacttctttctatttagttatccctatttctttcttagagtgtttgtttgtattttttgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacttctttctatttagttatccctatttctttcttagagtgtttgtttgtattttttgt 740

                         
Query: 541 ttttgttttttttt 554
           ||||||||||||||
Sbjct: 741 ttttgttttttttt 754


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space:   519504
Effective search space used:   519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)