Query= MSMg01no146_e13.b1 MSMg01no146_e13.b1 CHROMAT_FILE:
MSMg01no146_e13.b1 PHD_FILE: MSMg01no146_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:52 2005
(682 letters)
>mm_chr1_185617383_185618464
Length = 1082
Score = 619 bits (320), Expect = 0.0
Identities = 351/362 (96%), Gaps = 2/362 (0%)
Strand = Plus / Minus
Query: 1 gtccatgtgctttgcttttctaaccttccacctgttcagaagtgcggccccccacattta 60
|||||| ||||||||||||||||||||||||||| |||||||||||||| | || |||||
Sbjct: 362 gtccatatgctttgcttttctaaccttccacctgctcagaagtgcggcctctcagattta 303
Query: 61 aagaaaaaataaatcccctgtacatttgtaaataaaaaagaagactgggtaaataaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagaaaaaataaatcccctgtacatttgtaaataaaaaagaagactgggtaaataaagat 243
Query: 121 taaaattagcgtgacattatctttaagtaatatgataaggaagggagttggctcagtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taaaattagcgtgacattatctttaagtaatatgataaggaagggagttggctcagtcag 183
Query: 181 taaagtgtctgcctacaagcacaaggaccgccattcaatccccagaacctacattaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 taaagtgtctgcctacaagcacaaggaccgccattcaatccccagaacctacattaaaaa 123
Query: 241 aa--aatactaataaaagcaagtggagtgtttgtaatctcaacactgggaaggcggaggc 298
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaataatactaataaaagcaagtggagtgtttgtaatctcaacactgggaaggcggaggc 63
Query: 299 aaacacatccctaggacttgctgtttatcagcctagcaagttatagaccagtgagagacc 358
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 62 aaacacatccctaggacttgctggccaccagcctagcaagttatagaccagtgagagacc 3
Query: 359 tg 360
||
Sbjct: 2 tg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_e13.g1 MSMg01no146_e13.g1 CHROMAT_FILE:
MSMg01no146_e13.g1 PHD_FILE: MSMg01no146_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:52 2005
(374 letters)
>mm_chr1_185510402_185511173
Length = 772
Score = 617 bits (319), Expect = 0.0
Identities = 359/377 (95%), Gaps = 10/377 (2%)
Strand = Plus / Plus
Query: 1 acctggtgaataccccc----ccctagtccttacaacctcttaggaacgtgcgcagcatt 56
|||||||||||| | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 acctggtgaata----catttccctagtccttacaacctcttaggaacgtgcacagcatt 256
Query: 57 tagttgatggtagcattgagcttccgtaatgcctgatacttagggattgagacacaggaa 116
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 257 tagttgatggtagcattgagcttccgtaatgcctgatacctagggattgagacacaggaa 316
Query: 117 aatatctatagggcccaatgggctggtcatatttcctctgcctaggttgtgaggaaatgg 176
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aatatc--tagggcccaatgggctggtcatatttcctctgcctaggttgtgaggaaatgg 374
Query: 177 gcacagtggtcaggttctaacatatccttgggcactaggcactgcgtgggagggtgaaga 236
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 375 gcacagtggtcaggttctaacttatccttgggcactgggcactgcgtgggagggtgaaga 434
Query: 237 caaaagaagactgagacagagagtccaggaaagttcatgtgtggctttttgagcccagga 296
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 435 caaaagaagactgagacagagagtccaggaaagttcatgtgtggcttcctgagcccagga 494
Query: 297 aaagtattttcagaatgtgttggactcggtttatttttcttagtacttgtgagtggaaag 356
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 495 aaagtattttcagaatgtgttggacttggtttatttttcttagtacttgtgagtggaaag 554
Query: 357 gtgggagagtaaatgta 373
||||||||||| |||||
Sbjct: 555 gtgggagagtagatgta 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 772
Length adjustment: 9
Effective length of query: 365
Effective length of database: 763
Effective search space: 278495
Effective search space used: 278495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
