Query= MSMg01no148_c06.b1 MSMg01no148_c06.b1 CHROMAT_FILE:
MSMg01no148_c06.b1 PHD_FILE: MSMg01no148_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:56 2005
(655 letters)
>mm_chr1_174125360_174126414
Length = 1055
Score = 1236 bits (639), Expect = 0.0
Identities = 648/651 (99%)
Strand = Plus / Minus
Query: 5 gaattccacagggacttccatactcagtggccagtgctgaagacagggctctaagcccca 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gaattccacagggactttcatactcagtggccagtgctgaagacagggctctaagcccca 796
Query: 65 ggcaccagaataaatcctccaattactggcttgtcccttgattcccaggaagctctccct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggcaccagaataaatcctccaattactggcttgtcccttgattcccaggaagctctccct 736
Query: 125 tcatccttccattaggaagggagctggtgtggagttggatgcttaaagaatcaagcagct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tcatccttccattaggaagggagctggtgtggagttggatgcttaaagaatcaagcagct 676
Query: 185 aactaaagggagggggcgagtgtgctttccgttatactcagaaccaggagacagtctgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aactaaagggagggggcgagtgtgctttccgttatactcagaaccaggagacagtctgca 616
Query: 245 gcagtgacgcccttcctgaagtcacacttcagtcatgttttagagacaggccagcctcta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gcagtgacgcccttcctgaagtcacacttcagtcatgttttagagacaggccagcctcta 556
Query: 305 atgagaggagcaatcttgggagcccccacagacttacagaaattaggagacctgaggcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atgagaggagcaatcttgggagcccccacagacttacagaaattaggagacctgaggcaa 496
Query: 365 agttgagaggaacctgtttttctaaagctcagtactgaggcagagaagggcacagctgac 424
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agttgagaggaatttgtttttctaaagctcagtactgaggcagagaagggcacagctgac 436
Query: 425 tatgtttccacccttgagccttgggaaagctacaggtaagccctaggctctgagagcagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tatgtttccacccttgagccttgggaaagctacaggtaagccctaggctctgagagcagc 376
Query: 485 catgaatcatctgacccacgtcacctcttcagcatcactcgatcgcttgctcttccttgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 catgaatcatctgacccacgtcacctcttcagcatcactcgatcgcttgctcttccttgc 316
Query: 545 agcccctttattgcattggattcatagagaatatataggtatttaaacttctgacaataa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agcccctttattgcattggattcatagagaatatataggtatttaaacttctgacaataa 256
Query: 605 ttttaacttgatacatccaagtttaacttgctttttaatatatttatagat 655
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttttaacttgatacatccaagtttaacttgctttttaatatatttatagat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_c06.g1 MSMg01no148_c06.g1 CHROMAT_FILE:
MSMg01no148_c06.g1 PHD_FILE: MSMg01no148_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:57 2005
(170 letters)
>mm_chr1_173953342_173953910
Length = 569
Score = 321 bits (166), Expect = 1e-92
Identities = 169/170 (99%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 1 cattctcttgaaagaagtgcatttcatgttaacttttaatagtggccaacacatctccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattctcttgaaagaagtgcatttcatgttaacttttaatagtggccaacacatctccct 260
Query: 61 caggaaccttgcccaatactgcacctcagacagaaccaaactctatgctgcaaaggcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaaccttgcccaatactgcacctcagacagaaccaaactctatgctgcaaaggcctc 320
Query: 121 cagaatacacctccatacggcactaaggggcgggggggggggggggatcc 170
||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 cagaatacacctccatacggcactaaggggcgggggggggggggg-atcc 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 569
Length adjustment: 8
Effective length of query: 162
Effective length of database: 561
Effective search space: 90882
Effective search space used: 90882
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
