Query= MSMg01no148_p10.b1 MSMg01no148_p10.b1 CHROMAT_FILE:
MSMg01no148_p10.b1 PHD_FILE: MSMg01no148_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:02 2005
(344 letters)
>mm_chr1_188586235_188586976
Length = 742
Score = 578 bits (299), Expect = e-169
Identities = 333/345 (96%), Gaps = 4/345 (1%)
Strand = Plus / Minus
Query: 1 aaattgatggggcacagggcatacattttggatagatgtttgttatagattcataggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 542 aaattgatggggcacagggcatacattttggatagatgtttgttatagattcataggcga 483
Query: 61 gagtgcaagggacagacagagaaaggacaagggacagcagctggaaggatgccattgagt 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 482 gagtgcaagggacagacagagaaaggacaggggacagcagctggaaggatgccattgagt 423
Query: 121 gtctactcttgagacattttaaaggactctggacagaca-cggaggagaggcatggggat 179
||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 422 gtctactcttgagacattttaaaggactctggacagacaccgg-ggtgaggcatggggac 364
Query: 180 agatgagctgctcagcccagcttcctagaccacaatgtgtccaggcgcatcccttctgct 239
||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||||
Sbjct: 363 agatgagttgctcagcccagctacccagaccacaacgtgtccaggcgcatcccttctgct 304
Query: 240 cctgtcatgttctctgttatgccatctaggaagaggtgctaatttaaaagagataaaaaa 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 303 cctgtcatgttctctgttatgccatctaggaagaggtgctaatttaaaagagat--aaaa 246
Query: 300 aaagaaatctctctcttctgcctttctggcctctagaagaacatt 344
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aaagaaatctctctcttctgcctttctggcctctagaagaacatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 742
Length adjustment: 9
Effective length of query: 335
Effective length of database: 733
Effective search space: 245555
Effective search space used: 245555
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_p10.g1 MSMg01no148_p10.g1 CHROMAT_FILE:
MSMg01no148_p10.g1 PHD_FILE: MSMg01no148_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:02 2005
(338 letters)
>mm_chr1_188430540_188431277
Length = 738
Score = 619 bits (320), Expect = 0.0
Identities = 331/338 (97%), Gaps = 6/338 (1%)
Strand = Plus / Plus
Query: 1 acttgccactcccttcaggattaaggagcactgacctttggaacatggcctttatatgca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 acttgccactcccttcaggattaaggagcactgacctttggaacatggtctttatatgca 260
Query: 61 tgtcagagtatttttaagaatgggaaaatccaggatacgaataaacaacaaccagttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcagagtatttttaagaatgggaaaatccaggatacgaataaacaacaaccagttcca 320
Query: 121 aatgggagttatttttagacctgagattccaaagtatataaagccacagatatcagaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgggagttatttttagacctgagattccaaagtatataaagccacagatatcagaatg 380
Query: 181 gttctcaccctagtaacatgccttcctgtcccctctaatatactttccaccttctgtagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttctcaccctagtaacatgccttcctgtcccctctaatatactttccaccttctgtagc 440
Query: 241 atgtgctcacactcttggggatgcacacacacacacacacacacacacacacacacacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtgctcacactcttggggatgcacacacacacacacacacacacacacacac------ 494
Query: 301 tcactcacaatttttagatttttttttgagacagtgta 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tcactcacaatttttagatttttttttgagacagtgta 532
Score = 66.5 bits (34), Expect = 2e-15
Identities = 37/38 (97%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 264 caca-cacacacacacacacacacacacacacacacac 300
|||| |||||||||||||||||||||||||||||||||
Sbjct: 613 cacaccacacacacacacacacacacacacacacacac 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
