Query= MSMg01no149_n08.b1 MSMg01no149_n08.b1 CHROMAT_FILE:
MSMg01no149_n08.b1 PHD_FILE: MSMg01no149_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:14 2005
(506 letters)
>mm_chr1_193351749_193352654
Length = 906
Score = 926 bits (479), Expect = 0.0
Identities = 500/507 (98%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 1 agcagactgtggaaga-tatgtgaagttggcagtgctgagcctcctctggaagaaagaca 59
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agcagactgtggaagagtatgtgaagttggcagtgctgagcctcctctggaagaaagaca 259
Query: 60 ccatctatcacaaggtctctctattctggcaagccagaactttaatgtttccagccagag 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 260 ccatctatcacaaggtctctctattctggcgagccagaactttaatgtttccagccagag 319
Query: 120 ttgggttctaaggtttttcagattgttttcagtgttgtttcttcggtggttgctctctgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgggttctaaggtttttcagattgttttcagtgttgtttcttcggtggttgctctctgg 379
Query: 180 ctgtgtgtggagtttttaccctgtgcatacacagcctggtactcagccatatgcaatgtg 239
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 380 ctgtgtgtggagtttttaccctgtgcatacacagcctggcactcagccatatgcaatgtg 439
Query: 240 ttatacggggctctttctcctttttggcattttatctagaaatttccagatgacctggtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttatacggggctctttctcctttttggcattttatctagaaatttccagatgacctggtt 499
Query: 300 tccctaaactccagtttcttgtttctcaaactcagcaaggcttctggtgtgtttgcattc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tccctaaactccagtttcttgtttctcaaactcagcaaggcttctggtgtgtttgcattc 559
Query: 360 tccattctggggctgttatgtgagagtcacctccacagctgcatgctcacgtcatctggc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tccattctggggctgttatgtgagagtcacctccacagctgcatgctcacgtcatctggc 619
Query: 420 tcctcccctgggctcacttatctgcgctgcctcttgtacaatatttgaaaatctctgctt 479
||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 620 tcctccccttggcttacttatctgtgctgcttcttgtacaatatttgaaaatctctgctt 679
Query: 480 ggtctccttgactcactctcacagctg 506
|||||||||||||||||||||||||||
Sbjct: 680 ggtctccttgactcactctcacagctg 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_n08.g1 MSMg01no149_n08.g1 CHROMAT_FILE:
MSMg01no149_n08.g1 PHD_FILE: MSMg01no149_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:14 2005
(398 letters)
>mm_chr1_193490135_193490939
Length = 805
Score = 721 bits (373), Expect = 0.0
Identities = 394/405 (97%), Gaps = 7/405 (1%)
Strand = Plus / Minus
Query: 1 agtctccaacaacacaaagaaaaagaaggagggcgggggcgggggtggggagggcttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agtctccaacaacacaaagaaaaagaaggagggcgggggcgggggtggggagggcttaaa 546
Query: 61 ggaaggaaaggaggaaggtg-------agagtgaaaacaaaaacaagaacaggagtgaaa 113
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 545 ggaaggaaaggaggaaggtgagaggcaagagtgaaaacaaaaacaagaacaggagtgaaa 486
Query: 114 gcaggccttgtggaaatgcagtgtgcccagtagagtgatggaaacgtccttgtaaaggaa 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcaggccttgtggaaatgcagtgtgcccagtagagtgatggaaacgtccttgtaaaggaa 426
Query: 174 tggaagaattcaaaggtggggttggagggcagggcctggagaagatggccggaacaggtc 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tggaagaattcaaaggtggggttggagggcagggcctggagaagatggccggaacaggtc 366
Query: 234 taagaagatcagtatgtgtggtccgacgaagctcagaggatgcaaatgtgtactcagcac 293
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 365 taagaagatcagtaggtgtggtccgacgaagctcagaggatgcaaatgtgtactcagctc 306
Query: 294 tgaccaaccagtgaggatcctgtatgggccaggcacgtgctgatgagccgagcccctccc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgaccaaccagtgaggatcctgtatgggccaggcacgtgctgatgagccgagcccctccc 246
Query: 354 caccccgcagtgaaccagcccagtcctggatctcactgagcgccc 398
| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 245 cgccccgcagtgaaccagcccagtcctggacctcactgagcgccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 805
Length adjustment: 9
Effective length of query: 389
Effective length of database: 796
Effective search space: 309644
Effective search space used: 309644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
